Pairwise Alignments

Query, 298 a.a., tyrosine recombinase XerD from Enterobacter asburiae PDN3

Subject, 331 a.a., site-specific tyrosine recombinase XerD from Agrobacterium fabrum C58

 Score =  233 bits (594), Expect = 4e-66
 Identities = 146/317 (46%), Positives = 188/317 (59%), Gaps = 22/317 (6%)

Query: 3   KDLALIEQFLDALWLEKNLAENTLSAYRRDLTMLVEWLAHRGLSLASAQRDDLQALLGER 62
           +D A +E FL+ +  E+  A NTLS+Y  DL  L E+L  RG SL  AQ  DL A L   
Sbjct: 9   RDGARLESFLEMMSAERGAAANTLSSYEHDLADLREFLGRRGQSLTEAQTPDLSAYLTHL 68

Query: 63  IAGGYKATSSARLLSAMRRLFQHLYREKIREDDPSALLASPKLPQRLPKDLSEAQVERLL 122
            A G+ ATS AR LS+MR+ ++ LY E +R DDP+ ++ +P+    LPK +S A V RLL
Sbjct: 69  AAQGFAATSQARRLSSMRQFYRFLYSEGLRGDDPTGIIDAPRKGLALPKTMSVADVNRLL 128

Query: 123 ----QSPAVDLPLEL---RDKAMLELLYATGLRVSELVGLTMSDVSLRQGVVRVIGKGNK 175
               Q  A + P +L   R   +LELLYATG+RVSELV L +  +      + + GKGNK
Sbjct: 129 GLAAQEAATEGPGQLARIRMHLLLELLYATGMRVSELVSLPVKVLRQEGRFLMIRGKGNK 188

Query: 176 ERLVPLGEEAVYWLETYLEHGRPWLLNGTSIDV-------------LFPSQRAQ-QMTRQ 221
           +R+V L   A+  +E Y E GR  L    S                LFPS   +  + RQ
Sbjct: 189 DRMVLLSRAAIEAMEKY-EAGRKALSQEKSKAAASQKKTDTAESPWLFPSNSKEGHLPRQ 247

Query: 222 TFWHRIKHYATLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTH 281
            F   +K  A  AG+ +  +SPHVLRHAFA+HLL +GADLR VQ LLGHSD+STTQIYTH
Sbjct: 248 VFARDLKDIAIRAGLTASAVSPHVLRHAFASHLLQNGADLRAVQELLGHSDISTTQIYTH 307

Query: 282 VATERLRQLHQQHHPRA 298
           V  ERL++L Q HHP A
Sbjct: 308 VLEERLQELVQTHHPLA 324