Pairwise Alignments

Query, 1124 a.a., DNA helicase/exodeoxyribonuclease V, gamma subunit (EC 3.1.11.5) from Enterobacter asburiae PDN3

Subject, 1150 a.a., exodeoxyribonuclease V subunit gamma from Pseudomonas simiae WCS417

 Score =  646 bits (1666), Expect = 0.0
 Identities = 432/1159 (37%), Positives = 623/1159 (53%), Gaps = 101/1159 (8%)

Query: 4    VYHSNRLDVLEALMEFIVERERLDDPFEPEMVLVQSTGMAQWLQMSLSRK--------FG 55
            V H NRLD L +L+   + R  L  P E E+ LVQS G+AQWL+++L+           G
Sbjct: 13   VVHGNRLDELRSLVVSWMRRYPLA-PLENEIALVQSNGIAQWLKLALAEDPEDDDMGGCG 71

Query: 56   IAANIDFPLPASFIWEMFVRVL--PDIPEQSAFNKQGMSWKLMALLPEMLQHDEFAMLRH 113
            IAA ID  LP SF+W+++  VL   +IP +S  +K  ++W+LM LLPE++    F  L+ 
Sbjct: 72   IAAAIDVQLPGSFMWQLYRMVLGKDEIPPKSLLDKAPLTWRLMRLLPELIDQPHFEPLQR 131

Query: 114  YLNDDTDKRKLFQLASRTADLYDQYLVYRSDWLIRWEAG--ELVEGLPE------AQIWQ 165
            +L  DTD RK +QLA R ADL+DQY VYR+DWL  W AG  +L  G  E      A  WQ
Sbjct: 132  FLTHDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGESKPLNPANCWQ 191

Query: 166  APLWKALVEHTEKLGQPKWHRANLYDRFISILENAPERPARLPSRVFICGISALPPVYLK 225
            A LW+AL+    + G  +  RA ++ RFI  +    + P  LPSRV + GIS+LP   L+
Sbjct: 192  AELWRALLLDVGEEGMAE-SRAGVHQRFIERINTLEKAPEGLPSRVIVFGISSLPAQALE 250

Query: 226  ALNALGKHIDIHILFTNPCRQYWGDILDERWLARLVTRQRKRLFEERSVPLFKDGSTAGQ 285
            AL  L +   + +   NPCR +W DI+ ++ L R    + KR   +  +P+  D  T  Q
Sbjct: 251  ALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLR---NEYKRQARKAGMPVTIDPQTLHQ 307

Query: 286  LFDEDGIQNLPNPLLASWGKLGRDYIHMLSDITSSG-------EGDVDAFVDITPDSLLH 338
                       +PLLA+WGK GRDYI +L              +G +D F D  P +LL+
Sbjct: 308  H---------AHPLLAAWGKQGRDYISLLDSYDDPNSYRAAFRDGRIDLFSDSEPTTLLN 358

Query: 339  HIQLDILDLENRAVMGVTAKEFERSDSKRKLDADDRSITIHVCHSPQREVEVLHDQLLAM 398
             +Q DIL+L     +  T + +   D +R     D SI  H+ HS QREVE+LHDQLL  
Sbjct: 359  QLQDDILELRP---LNETRELWPAVDLQR-----DTSIRFHIAHSAQREVEILHDQLLQR 410

Query: 399  LQDDPELTPRDIVVMVADIDSYSPFIQAVFGSA--TGERYLPYAISDRRARQSHPALQAF 456
               DP L PRD++VMV D+DSY+P I+AVFG       R++P+ ++D+  R   P L A 
Sbjct: 411  FSADPSLRPRDVIVMVPDVDSYAPHIRAVFGQLERNDPRFIPFTLTDQGQRGRDPLLIAV 470

Query: 457  ITLLSLPDSRFISEDVLALLDVPVLAARFNINEEGLRYLRQWVNESGVRWGIDDDNVQEF 516
              LL LPDSRF   ++L LLDVP L  RF I E  L  L +W+  +G+RWG++ +     
Sbjct: 471  EHLLKLPDSRFPVSEILDLLDVPALRERFAIKERDLPTLHRWIEGAGIRWGLNAEQRAGL 530

Query: 517  ELPPT-GQHTWRFGLTRMLLGYAMESSQGEWNEVLPYDESSGLIAELVGHLASLLMQLNR 575
             LP    Q++WRFGL RMLLGYA+ +     + + PYDE  GL A L+G L +LL  L+ 
Sbjct: 531  GLPKELEQNSWRFGLRRMLLGYAVGTGAA-CDGIEPYDEIGGLDAALIGPLVALLDALSD 589

Query: 576  WRHELMQPRPLEAWLPVCRALLNDFFLPDSD-TEAAMALIETQWQAIIDEGVNSHYQEAI 634
                L  P     W    + L+  FFLP S+  +  +  +E   +  ++   +   Q+ +
Sbjct: 590  AHQALSLPASPTQWGERLQRLIQLFFLPSSEHDDYLLGQLEQLRETWLETCESVGLQDEL 649

Query: 635  PLSLLRDELTQRLDQERISQRFLAGPINICTLMPMRSIPFKVVCLLGMNDGVYPRALAPL 694
            PL+++R+     LDQ R+SQRFLAG +N CTLMPMR+IPFK++CLLGMNDG YPRA  PL
Sbjct: 650  PLTVVREAWLAGLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLICLLGMNDGDYPRAQPPL 709

Query: 695  GFDLMSADPKRGDRSRRDDDRYLFLEALISAQSKLYISYIGRSIQDNSERFPSVLVQELV 754
             FDLM +D + GDRSRR+DDRYL LEAL+SA+ +LY+S++GRSI+DNS+R  SVL+ +L 
Sbjct: 710  DFDLMGSDYRPGDRSRREDDRYLLLEALLSARDQLYVSWVGRSIRDNSDRPASVLIGQLR 769

Query: 755  DYIGQSHYLPGDEERNCDESEQRVKAHITCFHSRMPFDPVNYTASERQ-SYAQEWLPAAK 813
            D++    +L   ++   +   Q         H   PF    +   +   SYA+EW    +
Sbjct: 770  DHLASGWHLANSDKPLIEAMTQE--------HPLQPFSARYFHEGDALFSYAREWQLLHE 821

Query: 814  KEGSAHTDFIQELDP-RPVDTLTFEQLQRFWAHPVRAFFQQRLQVNFRSEESEIPDAEPF 872
               +  T+   +L P +  + L+  QLQ F  +PV+ FF QRL+V F + E  + D EPF
Sbjct: 822  ASDALPTE--HDLAPHQQEEPLSLGQLQDFLRNPVKHFFSQRLKVFFEAAEVPLADEEPF 879

Query: 873  TLEGLERYQLNLQLLN-ALVEEEDADKLYR----RYRAAGQLPYGAFGEIVWEAQCQEMT 927
             L+ L+RY L+  LLN AL   +  D+       R + +G LP   FGE +     + + 
Sbjct: 880  VLDALQRYSLSDSLLNAALTRPDQLDQTLNAQALRLQGSGLLPMVGFGECLRNELIEPLP 939

Query: 928  ALAERVREC----RQPGKSIE-IDLNCNGVQLTGWLTQV---QPDGLLRWRPSMLSVS-- 977
             L  R ++       P    E +    +GVQL GW++ +      GLL       S+   
Sbjct: 940  DLLRRYQQLLALWPTPHTGAEPVSFEHHGVQLEGWISGLHRRSDGGLLSVTTIPNSIGSI 999

Query: 978  ------QGLQLWLEHLVYSADGHKGESRIFVRKEGEWRFPPMESEQALRYLSLHIEGYRQ 1031
                  + ++ W+ H+V  A G    + + V  +     PP++   A   L   +  +  
Sbjct: 1000 KTRKWHRLIRPWVNHVVACACGLPLSTGL-VASDDTLLLPPLDKANAQEVLGHLLLAWHA 1058

Query: 1032 GMNKPLLLLPESGGAWIKACYDAQNDAMLTDEASLQKARSKFMQAYEGNMMVRGEGEDVW 1091
            GM+KPL +  ++  AW+     +Q D +        KA +  ++ YEG+ +   EGE   
Sbjct: 1059 GMSKPLPVAVKTAFAWL-----SQTDPV--------KAEAAAVKTYEGDGL-NNEGERRE 1104

Query: 1092 YQRLWRTLEPEYFEAITEE 1110
               L R   P+Y   I  E
Sbjct: 1105 TPALTRQF-PDYATLIASE 1122