Pairwise Alignments

Query, 1124 a.a., DNA helicase/exodeoxyribonuclease V, gamma subunit (EC 3.1.11.5) from Enterobacter asburiae PDN3

Subject, 1160 a.a., ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease, recombinase subunit from Pseudomonas putida KT2440

 Score =  683 bits (1763), Expect = 0.0
 Identities = 440/1133 (38%), Positives = 624/1133 (55%), Gaps = 97/1133 (8%)

Query: 4    VYHSNRLDVLEALMEFIVERERLDDPFEPEMVLVQSTGMAQWLQMSLSRK--------FG 55
            + H NRLD L +L+   + R  L  P E E+ LVQS G+AQWL+++L+           G
Sbjct: 13   IVHGNRLDDLRSLVVSWMRRYPLA-PLENEIALVQSNGIAQWLKLALAEDPLEDDQGGCG 71

Query: 56   IAANIDFPLPASFIWEMFVRVL--PDIPEQSAFNKQGMSWKLMALLPEMLQHDEFAMLRH 113
            IAA ID  LP SF+W+++  VL   +IPE S  +K  ++W+LM LLP +++   F  LR 
Sbjct: 72   IAAAIDVQLPGSFMWQLYRSVLGRSEIPEVSLLDKAPLTWRLMRLLPALIERPHFEPLRR 131

Query: 114  YLNDDTDKRKLFQLASRTADLYDQYLVYRSDWLIRWEAGELV--------EGLPEAQIWQ 165
            +L DD+D RK +QLA R ADL+DQY VYR+DWL  W  GE V        + LP    WQ
Sbjct: 132  FLTDDSDLRKRYQLAERLADLFDQYQVYRADWLKDWATGEHVINTARGERKVLPPGNRWQ 191

Query: 166  APLWKALVEHTEKLGQPKWHRANLYDRFISILENAPERPARLPSRVFICGISALPPVYLK 225
            A LW+AL+E   + G  +  RA ++ RFI  + +  + PA LP RV + GIS+LP   L+
Sbjct: 192  AELWRALLEDVGEQGMAQ-SRAGVHQRFIERINSLEQAPAGLPPRVIVFGISSLPAQALE 250

Query: 226  ALNALGKHIDIHILFTNPCRQYWGDILDERWLARLVTRQRKRLFEERSVPLFKDGSTAGQ 285
            AL  L +   + +   NPCR +W DI+ ++ L R    Q KR   ++ +PL  D  T  Q
Sbjct: 251  ALAGLSRFSQVLLCVHNPCRHHWADIVADKDLLR---HQYKRQQRKQGMPLQLDDQTLHQ 307

Query: 286  LFDEDGIQNLPNPLLASWGKLGRDYIHMLSDITSSG-------EGDVDAFVDITPDSLLH 338
                       +PLLA+WGK GRDYI++L      G       +G +D F D +P +LL+
Sbjct: 308  H---------AHPLLAAWGKQGRDYINLLDSYDDPGSYQGVFSDGRIDLFSDGSPTTLLN 358

Query: 339  HIQLDILDLENRAVMGVTAKEFERSDSKRKLDADDRSITIHVCHSPQREVEVLHDQLLAM 398
             +Q DIL+L   A    + + +   D+ +     DRSI  H+ HSPQREVE+LHDQLLA 
Sbjct: 359  ELQDDILELRPLAE---SRERWPAVDTTK-----DRSIRFHIAHSPQREVEILHDQLLAR 410

Query: 399  LQDDPELTPRDIVVMVADIDSYSPFIQAVFGSA--TGERYLPYAISDRRARQSHPALQAF 456
               DP L PRD++VM+ DID+Y+P I+AVFG       RY+P+ ++D+  R   P L A 
Sbjct: 411  FSADPTLRPRDVIVMLPDIDTYAPHIRAVFGQLQRNDPRYIPFTLTDQGQRGREPLLIAL 470

Query: 457  ITLLSLPDSRFISEDVLALLDVPVLAARFNINEEGLRYLRQWVNESGVRWGIDDDNVQEF 516
              LL LPDSRF   +VL LLDVP + ARF I E  L  L +W+  +G+RWG+D       
Sbjct: 471  EHLLKLPDSRFAVSEVLDLLDVPAVRARFGIRENDLPTLHRWIEGAGIRWGLDAAQRASL 530

Query: 517  ELPP-TGQHTWRFGLTRMLLGYAMESSQGEWNEVLPYDESSGLIAELVGHLASLLMQLNR 575
             LP    Q++WRFGL RMLLGYA+   +   + + PYDE  GL A L+G L +LL  L  
Sbjct: 531  GLPAGLEQNSWRFGLRRMLLGYAVGVGEA-CDGIEPYDEIGGLDAALIGPLVALLDALEV 589

Query: 576  WRHELMQPRPLEAWLPVCRALLNDFFLPDSDTEAAMAL----IETQWQAIIDEGVNSHYQ 631
                L +P  +  W     ALL+ FFL + + +  + +    +   W  +  E V  H  
Sbjct: 590  ACQALSEPATVSQWGERLHALLHVFFLAEDEGDEFLLMQLQDLRDSWLEVC-ETVGLH-- 646

Query: 632  EAIPLSLLRDELTQRLDQERISQRFLAGPINICTLMPMRSIPFKVVCLLGMNDGVYPRAL 691
            + +PL+++R+     LDQ ++SQRFLAG +N CTLMPMR+IPF+VVCLLGMNDG YPRA 
Sbjct: 647  DPLPLTVVREAWLSGLDQGKLSQRFLAGSVNFCTLMPMRAIPFRVVCLLGMNDGDYPRAQ 706

Query: 692  APLGFDLMSADPKRGDRSRRDDDRYLFLEALISAQSKLYISYIGRSIQDNSERFPSVLVQ 751
             PL FDLM++D + GDRSRR+DDRYL LEAL+SA+ +LY+S++GRSI+DNSER  SVL+ 
Sbjct: 707  PPLDFDLMASDYRPGDRSRREDDRYLLLEALLSARDQLYVSWVGRSIRDNSERPASVLIG 766

Query: 752  ELVDYIGQSHYLPGDEERNCDESEQRVKAHITCFHSRMPFDPVNY-TASERQSYAQEWLP 810
            +L D+I    +L   ++       +++   +T  H   PF P  +   S   SYA EW  
Sbjct: 767  QLRDHIAAGWHLADAQQGQPARPGEQLLHALTQEHPLQPFSPRYFQKGSPLFSYAHEW-Q 825

Query: 811  AAKKEGSAHTDFIQELDP-RPVDTLTFEQLQRFWAHPVRAFFQQRLQVNFRSEESEIPDA 869
               ++G         L P +  + L+  QL  F  HPVR FF QRL+V F + E+  PD 
Sbjct: 826  VLHQQGETDAQSEPGLPPYQDAEALSLHQLNDFLRHPVRHFFSQRLKVYFEALEAPTPDE 885

Query: 870  EPFTLEGLERYQLNLQLLN-ALVEEEDADKLY----RRYRAAGQLPYGAFGEIVWEAQCQ 924
            EPF L+ L+RY  +  LL  AL E ++A++      RR +A G LP   FGE++     +
Sbjct: 886  EPFVLDTLQRYGASESLLGAALAEPDNAEQALRAQARRLQACGLLPLAGFGELLQNELIE 945

Query: 925  EMTALAERVRECRQPGK-----SIEIDLNCNGVQLTGWL---TQVQPDGLLRWRPSMLSV 976
             +  L +R ++  Q        ++ +       +L GWL    Q +   LL       ++
Sbjct: 946  PLPDLLQRHQQLLQRWPQLVEGALPVHFEHGQHRLEGWLGRVFQAEDQSLLSITTVPNTI 1005

Query: 977  SQG---------LQLWLEHLVYSADGHKGESRIFVRKEGEWRFPPMESEQALRYLSLHIE 1027
            S G         +  W+ HL   A G+   S + V  +      P+   QA + L   + 
Sbjct: 1006 SAGRNNLKWHRLIAPWVTHLAACAAGYPYNSAL-VASDLTLLLAPLPQAQAAQLLGDLLV 1064

Query: 1028 GYRQGMNKPLLLLPESGGAWIKACYDAQNDAMLTDEASLQKARSKFMQAYEGN 1080
              +  MN PL +  ++  AW+     AQ+DA         KA +   +AYEG+
Sbjct: 1065 ARQAAMNAPLPVAAKTAFAWL-----AQDDA--------DKALAAAARAYEGD 1104