Pairwise Alignments

Query, 1124 a.a., DNA helicase/exodeoxyribonuclease V, gamma subunit (EC 3.1.11.5) from Enterobacter asburiae PDN3

Subject, 1122 a.a., exonuclease V (RecBCD complex), gamma chain from Escherichia coli BL21

 Score = 1845 bits (4778), Expect = 0.0
 Identities = 885/1124 (78%), Positives = 997/1124 (88%), Gaps = 2/1124 (0%)

Query: 1    MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMVLVQSTGMAQWLQMSLSRKFGIAANI 60
            MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEM+LVQSTGMAQWLQM+LS+KFGIAANI
Sbjct: 1    MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60

Query: 61   DFPLPASFIWEMFVRVLPDIPEQSAFNKQGMSWKLMALLPEMLQHDEFAMLRHYLNDDTD 120
            DFPLPASFIW+MFVRVLP+IP++SAFNKQ MSWKLM LLP++L+ ++F +LRHYL DD+D
Sbjct: 61   DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120

Query: 121  KRKLFQLASRTADLYDQYLVYRSDWLIRWEAGELVEGLPEAQIWQAPLWKALVEHTEKLG 180
            KRKLFQL+S+ ADL+DQYLVYR +WL +WE G LVEGL EAQ WQAPLWKALVE+T +LG
Sbjct: 121  KRKLFQLSSKAADLFDQYLVYRPEWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHELG 180

Query: 181  QPKWHRANLYDRFISILENAPERPARLPSRVFICGISALPPVYLKALNALGKHIDIHILF 240
            QP+WHRANLY RFI  LE+A   P  LPSRVFICGISALPPVYL+AL ALGKHI+IH+LF
Sbjct: 181  QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240

Query: 241  TNPCRQYWGDILDERWLARLVTRQRKRLFEERSVPLFKDGSTAGQLFDEDGIQNLPNPLL 300
            TNPCR YWGDI D  +LA+L+TRQR+  FE+R +PLF+D   AGQLF+ DG Q++ NPLL
Sbjct: 241  TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300

Query: 301  ASWGKLGRDYIHMLSDITSSGEGDVDAFVDITPDSLLHHIQLDILDLENRAVMGVTAKEF 360
            ASWGKLGRDYI++LSD+ SS E  +DAFVD+TPD+LLH+IQ DIL+LENRAV GV  +EF
Sbjct: 301  ASWGKLGRDYIYLLSDLESSQE--LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358

Query: 361  ERSDSKRKLDADDRSITIHVCHSPQREVEVLHDQLLAMLQDDPELTPRDIVVMVADIDSY 420
             RSD+KR LD  D SIT HVCHSPQREVEVLHD+LLAML++DP LTPRDI+VMVADIDSY
Sbjct: 359  SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418

Query: 421  SPFIQAVFGSATGERYLPYAISDRRARQSHPALQAFITLLSLPDSRFISEDVLALLDVPV 480
            SPFIQAVFGSA  +RYLPYAISDRRARQSHP L+AFI+LLSLPDSRF+SEDVLALLDVPV
Sbjct: 419  SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478

Query: 481  LAARFNINEEGLRYLRQWVNESGVRWGIDDDNVQEFELPPTGQHTWRFGLTRMLLGYAME 540
            LAARF+I EEGLRYLRQWVNESG+RWGIDDDNV+E ELP TGQHTWRFGLTRMLLGYAME
Sbjct: 479  LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538

Query: 541  SSQGEWNEVLPYDESSGLIAELVGHLASLLMQLNRWRHELMQPRPLEAWLPVCRALLNDF 600
            S+QGEW  VLPYDESSGLIAELVGHLASLLMQLN WR  L Q RPLE WLPVCR +LN F
Sbjct: 539  SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598

Query: 601  FLPDSDTEAAMALIETQWQAIIDEGVNSHYQEAIPLSLLRDELTQRLDQERISQRFLAGP 660
            FLPD++TEAAM LIE QWQAII EG+ + Y +A+PLSLLRDEL QRLDQERISQRFLAGP
Sbjct: 599  FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658

Query: 661  INICTLMPMRSIPFKVVCLLGMNDGVYPRALAPLGFDLMSADPKRGDRSRRDDDRYLFLE 720
            +NICTLMPMRSIPFKVVCLLGMNDGVYPR LAPLGFDLMS  PKRGDRSRRDDDRYLFLE
Sbjct: 659  VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718

Query: 721  ALISAQSKLYISYIGRSIQDNSERFPSVLVQELVDYIGQSHYLPGDEERNCDESEQRVKA 780
            ALISAQ KLYISYIGRSIQDNSERFPSVLVQEL+DYIGQSHYLPGDE  NCDESE RVKA
Sbjct: 719  ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778

Query: 781  HITCFHSRMPFDPVNYTASERQSYAQEWLPAAKKEGSAHTDFIQELDPRPVDTLTFEQLQ 840
            H+TC H+RMPFDP NY   ERQSYA+EWLPAA + G AH++F+Q L     +T+  E LQ
Sbjct: 779  HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQ 838

Query: 841  RFWAHPVRAFFQQRLQVNFRSEESEIPDAEPFTLEGLERYQLNLQLLNALVEEEDADKLY 900
            RFWAHPVRAFFQ RLQVNFR+E+SEIPD EPF LEGL RYQ+N QLLNALVE++DA++L+
Sbjct: 839  RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF 898

Query: 901  RRYRAAGQLPYGAFGEIVWEAQCQEMTALAERVRECRQPGKSIEIDLNCNGVQLTGWLTQ 960
            RR+RAAG LPYGAFGEI WE QCQEM  LA+RV  CRQPG+S+EIDL CNGVQ+TGWL Q
Sbjct: 899  RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQ 958

Query: 961  VQPDGLLRWRPSMLSVSQGLQLWLEHLVYSADGHKGESRIFVRKEGEWRFPPMESEQALR 1020
            VQPDGLLRWRPS+LSV+QG+QLWLEHLVY A G  GESR+F+RK+GEWRFPP+ +EQAL 
Sbjct: 959  VQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALH 1018

Query: 1021 YLSLHIEGYRQGMNKPLLLLPESGGAWIKACYDAQNDAMLTDEASLQKARSKFMQAYEGN 1080
            YLS  IEGYR+GM+ PLL+LPESGGAW+K CYDAQNDAML D+++LQKAR+KF+QAYEGN
Sbjct: 1019 YLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGN 1078

Query: 1081 MMVRGEGEDVWYQRLWRTLEPEYFEAITEEAQRYLLPLFKFNQS 1124
            MMVRGEG+D+WYQRLWR L PE  EAI E++QR+LLPLF+FNQS
Sbjct: 1079 MMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS 1122