Pairwise Alignments

Query, 1180 a.a., DNA helicase/exodeoxyribonuclease V, beta subunit (EC 3.1.11.5) from Enterobacter asburiae PDN3

Subject, 752 a.a., Superfamily I DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 85.9 bits (211), Expect = 1e-20
 Identities = 109/502 (21%), Positives = 202/502 (40%), Gaps = 89/502 (17%)

Query: 332 MTEIRDAVAREKRRRGELGFDDMLSRLDAALCSENGEALAAAIRTRFPVAMIDEFQDTDP 391
           M EI  A  +   +   + FDD+L   +  L  ++ + L    + RF   ++DEFQDT+ 
Sbjct: 174 MGEIYRAYQKRLFKSSAMDFDDLLFNTNV-LFRDHPDVLNK-YQQRFRYVLVDEFQDTNL 231

Query: 392 QQYRIFRRIWRQQPGTALLLIGDPKQAIYAFRGADIFTYMKARSEV-DAHYT-LDTNWRS 449
            QY I +++        + ++GD  Q+IYAFRGADI   +    +  D H   L+ N+RS
Sbjct: 232 SQYLITKKLAAVHQN--ICVVGDDAQSIYAFRGADIQNILNFEKDYPDLHVVKLEQNYRS 289

Query: 450 SPGMVESVNALFSRMDTAFMFREIPFQPVKFAEKNASLRFEFNGETQPAMNFWLLDGEGY 509
           +  +VE+ N++                     EKN         + Q   N W  +G G 
Sbjct: 290 TKNIVEAANSII--------------------EKN---------KAQLKKNVWTQNGNGD 320

Query: 510 GVADYQNAMAQHCAAQIRDWLSAGAHGKALLWKGDKPAPVKASDITVLVRSRQEAALIRD 569
            +   ++A        +   +    + K L          + SD  +L R+  ++  + +
Sbjct: 321 LIELIKSASDNEEGRMVASTIFEEKNNKKL----------QNSDFAILYRTNSQSRALEE 370

Query: 570 ALTLLNIPSVYLSNRDSVFETLEAQEMLWLLQAVLAPERESTLRSALASAMLGLNARDID 629
           AL  +NI S  +    S ++  E ++++   + V+  + E   +  +     G+    ++
Sbjct: 371 ALRKMNI-SYKIVGGLSFYQRKEIKDLMAYFRYVVNQDDEEAFKRIINYPKRGIGLSSVE 429

Query: 630 -----ALNNDEAAWDAVVEE--FVRYREKWQKRGVMAMVR--ELMAQRHIAENMLATAGG 680
                A  +D   W  V     F+  R          M++  ++  +R  A    +T   
Sbjct: 430 KMMVAAYEHDIPLWQVVTNSSSFLSGRASNSVSDFATMIKSFQMEVERKDAYEAASTIAK 489

Query: 681 ERRLTDILHISELLQEAGTQLESEHALVRWLAQQIADPNSNSSS-----QQMRLESDKH- 734
           +  L   L+  + + E   + E+   L+  + + + +P +   +     Q++ L +D   
Sbjct: 490 QSGLLRELYEDKTI-EGLNRYENVQELLNAIKEYVDNPENEDKNLGAFLQEIALLTDNDR 548

Query: 735 ------LVQIVTIHKSKGLEYPLVWLPFIANYRVQDQAFYHDRESFEAVLDLSNAESSLE 788
                  V ++TIH SKGLE+                     R+ F   L+     S + 
Sbjct: 549 DKDEMDAVTLMTIHSSKGLEF---------------------RQVFVVGLEEDLFPSQMM 587

Query: 789 LAEAERLAEDLRLLYVALTRSV 810
           +   E L E+ RL YVA TR++
Sbjct: 588 MQSREDLEEERRLFYVATTRAM 609



 Score = 29.3 bits (64), Expect = 0.001
 Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 9/92 (9%)

Query: 16  QGERLIEASAGTGKTFTIAALYLRLLLGLGGNAAFPRPLSVEELLVVTFTEAATAELRGR 75
           +G  +I A AG+GKT  +      L+          + +   ++L +TFT  A +E+R R
Sbjct: 19  EGPLMIIAGAGSGKTRVLTFRIAHLIRA--------KNVDPFQILALTFTNKAASEMRNR 70

Query: 76  IRSNIHELRIACLRQSTDNPLYASLLEEIADK 107
           I   I  L        T + ++A +L   ++K
Sbjct: 71  IERLI-GLEARNTWMGTFHSIFAKILRVESEK 101