Pairwise Alignments

Query, 1180 a.a., DNA helicase/exodeoxyribonuclease V, beta subunit (EC 3.1.11.5) from Enterobacter asburiae PDN3

Subject, 1180 a.a., exonuclease V (RecBCD complex), beta subunit from Escherichia coli BL21

 Score = 1854 bits (4803), Expect = 0.0
 Identities = 918/1180 (77%), Positives = 1029/1180 (87%)

Query: 1    MTDTAESLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGNAAFPRPLSVEELL 60
            M+D AE+LDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGG+AAFPRPL+VEELL
Sbjct: 1    MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELL 60

Query: 61   VVTFTEAATAELRGRIRSNIHELRIACLRQSTDNPLYASLLEEIADKQQAAQWLLLAERQ 120
            VVTFTEAATAELRGRIRSNIHELRIACLR++TDNPLY  LLEEI DK QAAQWLLLAERQ
Sbjct: 61   VVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLEEIDDKAQAAQWLLLAERQ 120

Query: 121  MDEASVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESVLRYQACADFWRRHCYPLQRDIA 180
            MDEA+VFTIHGFCQRML+LNAFESGMLFEQQLIEDES+LRYQACADFWRRHCYPL R+IA
Sbjct: 121  MDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPREIA 180

Query: 181  EAVHALWKGPEALLRAIDRYLQGEAPVIKSPPPADETLASRHEKIIARIADIKQKWIESV 240
            + V   WKGP+ALLR I+RYLQGEAPVIK+PPP DETLASRH +I+ARI  +KQ+W ++V
Sbjct: 181  QVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETLASRHAQIVARIDTVKQQWRDAV 240

Query: 241  GEIDVIIENSGIDRRKFNRGNQGKWIDKISAWAQEETRGYQLPDALEKFSRRFLVERTKA 300
            GE+D +IE+SGIDRRKFNR NQ KWIDKISAWA+EET  YQLP++LEKFS+RFL +RTKA
Sbjct: 241  GELDALIESSGIDRRKFNRSNQAKWIDKISAWAEEETNSYQLPESLEKFSQRFLEDRTKA 300

Query: 301  DGIVPEHPLFVAIETLLAEPLTLNDLMITRAMTEIRDAVAREKRRRGELGFDDMLSRLDA 360
             G  P HPLF AI+ LLAEPL++ DL+ITRA+ EIR+ VAREKRRRGELGFDDMLSRLD+
Sbjct: 301  GGETPRHPLFEAIDQLLAEPLSIRDLVITRALAEIRETVAREKRRRGELGFDDMLSRLDS 360

Query: 361  ALCSENGEALAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRQQPGTALLLIGDPKQAIY 420
            AL SE+GE LAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIW  QP TALLLIGDPKQAIY
Sbjct: 361  ALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHHQPETALLLIGDPKQAIY 420

Query: 421  AFRGADIFTYMKARSEVDAHYTLDTNWRSSPGMVESVNALFSRMDTAFMFREIPFQPVKF 480
            AFRGADIFTYMKARSEV AHYTLDTNWRS+PGMV SVN LFS+ D AFMFREIPF PVK 
Sbjct: 421  AFRGADIFTYMKARSEVHAHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIPFIPVKS 480

Query: 481  AEKNASLRFEFNGETQPAMNFWLLDGEGYGVADYQNAMAQHCAAQIRDWLSAGAHGKALL 540
            A KN +LRF F GETQPAM  WL++GE  GV DYQ+ MAQ CAAQIRDWL AG  G+ALL
Sbjct: 481  AGKNQALRFVFKGETQPAMKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRGEALL 540

Query: 541  WKGDKPAPVKASDITVLVRSRQEAALIRDALTLLNIPSVYLSNRDSVFETLEAQEMLWLL 600
              GD   PV+ASDI+VLVRSRQEAA +RDALTLL IPSVYLSNRDSVFETLEAQEMLWLL
Sbjct: 541  MNGDDARPVRASDISVLVRSRQEAAQVRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLL 600

Query: 601  QAVLAPERESTLRSALASAMLGLNARDIDALNNDEAAWDAVVEEFVRYREKWQKRGVMAM 660
            QAV+ PERE+TLRSALA++M+GLNA DI+ LNNDE AWD VVEEF  YR+ W+KRGVM M
Sbjct: 601  QAVMTPERENTLRSALATSMMGLNALDIETLNNDEHAWDVVVEEFDGYRQIWRKRGVMPM 660

Query: 661  VRELMAQRHIAENMLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLAQQIADPNS 720
            +R LM+ R+IAEN+LATAGGERRLTDILHISELLQEAGTQLESEHALVRWL+Q I +P+S
Sbjct: 661  LRALMSARNIAENLLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDS 720

Query: 721  NSSSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIANYRVQDQAFYHDRESFEAVLDL 780
            N+SSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFI N+RVQ+QAFYHDR SFEAVLDL
Sbjct: 721  NASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQEQAFYHDRHSFEAVLDL 780

Query: 781  SNAESSLELAEAERLAEDLRLLYVALTRSVWHCSLGVAPLFRRRGEKTGESDFHLSALGR 840
            + A  S++LAEAERLAEDLRLLYVALTRSVWHCSLGVAPL RRRG+K G++D H SALGR
Sbjct: 781  NAAPESVDLAEAERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGR 840

Query: 841  LIQHGEPKDAAGLRQCIESLCTEHVALHIPSQPDNSRWQMPELRDSQLHARQVVRTIADD 900
            L+Q GEP+DAAGLR CIE+LC + +A       DN  WQ+ ++  ++L+A+ + R   D+
Sbjct: 841  LLQKGEPQDAAGLRTCIEALCDDDIAWQTAQIGDNQPWQVNDVSTAELNAKTLQRLPGDN 900

Query: 901  WRVTSYSGLQQHGQSIAQDLMPKLDVDAAGAGSVPAEPVLTPHQFPRGASPGTFLHSLFE 960
            WRVTSYSGLQQ G  IAQDLMP+LDVDAAG  SV  EP LTPHQFPRGASPGTFLHSLFE
Sbjct: 901  WRVTSYSGLQQRGHGIAQDLMPRLDVDAAGVASVVEEPTLTPHQFPRGASPGTFLHSLFE 960

Query: 961  ELDFTQPVSEEWVLKMLQSGGYDAQWQPVLTDWIRAVLHAPLTTQGISLNQLTAKDKQVE 1020
            +LDFTQPV   WV + L+ GG+++QW+PVLT+WI AVL APL   G+SL+QL+A++KQVE
Sbjct: 961  DLDFTQPVDPNWVREKLELGGFESQWEPVLTEWITAVLQAPLNETGVSLSQLSARNKQVE 1020

Query: 1021 MEFYLPIASPLRAEALDALIREYDPLSAGCPPLNFRQVQGMLKGFIDLVFRHEGRYYLLD 1080
            MEFYLPI+ PL A  LD LIR++DPLSAGCPPL F QV+GMLKGFIDLVFRHEGRYYLLD
Sbjct: 1021 MEFYLPISEPLIASQLDTLIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLD 1080

Query: 1081 YKSNWLGESSEAYTQDAMASAMQMHRYDLQYQLYTLALHRYLRHRMADYRYEDHFGGVIY 1140
            YKSNWLGE S AYTQ AMA+AMQ HRYDLQYQLYTLALHRYLRHR+ADY Y+ HFGGVIY
Sbjct: 1081 YKSNWLGEDSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYDRHFGGVIY 1140

Query: 1141 LFLRGVDANDPRSGVFSTRPAAELIEKMDNLFAASTEEVA 1180
            LFLRGVD   P+ G+++TRP A LI+ MD +FA  T E A
Sbjct: 1141 LFLRGVDKEHPQQGIYTTRPNAGLIDLMDEMFAGMTLEEA 1180