Pairwise Alignments

Query, 606 a.a., DNA helicase/exodeoxyribonuclease V, alpha subunit (EC 3.1.11.5) from Enterobacter asburiae PDN3

Subject, 689 a.a., exodeoxyribonuclease V subunit alpha from Pseudomonas simiae WCS417

 Score =  416 bits (1069), Expect = e-120
 Identities = 288/652 (44%), Positives = 377/652 (57%), Gaps = 65/652 (9%)

Query: 11  VEQRLLRHLDVQFAMMV----AGEEPAVMLAAAILSKDAGEGHVCLPL-SRLAVDE---K 62
           V++  LR LD  F   +       +P V+LAAA+ S   G GHVCL L   L   +    
Sbjct: 28  VDRGWLRALDKAFVGFLHELDPQADPLVLLAAALTSHQLGHGHVCLDLFETLKAPDFALS 87

Query: 63  MPPA--LQACFALLG-------DAVDWQEILLGSPAVSGADTGT------PMILVGERLY 107
           +PP   LQ    LL        D   W   L  S  V+ A  G       P++L G+RLY
Sbjct: 88  LPPEGDLQTGAMLLPSQLLDGLDGAHWCHALAASHLVALAVDGRESAQSRPLVLSGKRLY 147

Query: 108 LNRLWRNELTVARFFSETNAPLPCDEAQLRQTLDTLFTS---DDATDWQKVAAAVALTRR 164
           L R W  E  +        A      A L Q L++LF     D   DWQK+A A+A    
Sbjct: 148 LRRYWTYERRIDTALRLRLATQESVAADLPQRLNSLFDQPPPDGVIDWQKLACALATRGA 207

Query: 165 ISVISGGPGTGKTTTVAKLLAALIQLSSE--QKCRIRLAAPTGKAAARLTESLGGALQKL 222
            S+++GGPGTGKTTTV +LLA L   + E     RIRLAAPTGKAAARLTES+   +  L
Sbjct: 208 FSIVTGGPGTGKTTTVVRLLALLQAPAVEVGSPLRIRLAAPTGKAAARLTESISQQVLSL 267

Query: 223 PLTREQLALFPNEASTLHRLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLTMMSRLI 282
            +        P + +T+HRLLG++PG++  R+H GNPL LDVLVVDEASMIDL MM+ L+
Sbjct: 268 KVPDSVKEKIPTQVTTVHRLLGSRPGTRHFRHHIGNPLPLDVLVVDEASMIDLEMMANLL 327

Query: 283 DALPPHARVIFLGDRDQLASVEAGAVLGDICTYASLG-YTAERAQELARLTGCSLTSE-- 339
           DALPPHAR++ LGD+DQLASVEAGAVLGD+C  A  G Y+AE  Q L  ++G  L++   
Sbjct: 328 DALPPHARLVLLGDKDQLASVEAGAVLGDLCRDAEAGFYSAETRQWLQAVSGEDLSASGL 387

Query: 340 NHSLAGA--LRDSLCLLQKSYRFGSDSGIGQLAAAVNRGDRRTTTAVFDG-TFTDIEKKS 396
              L G+  L   + +L+ S RFG  SGIGQLA  VN+ +      +F   +  D+   S
Sbjct: 388 QEDLDGSHPLAQQVVMLRYSRRFGEGSGIGQLARWVNQQNPEEARKLFAARSHDDLFCVS 447

Query: 397 LQSGEEY---QAMLD---DALQGYQHFLTGVQ----QQSTP----------EQVIAAFGE 436
           L+   ++   + +LD   +  +GY+++L  +Q       TP          +Q++ AF  
Sbjct: 448 LKGEHDHALERLVLDGQGEGAEGYRYYLNLLQSARPSPETPRESDAWTHWAQQLLQAFDA 507

Query: 437 YQLLCALREGPFGVRGLNDRLEQLLAQKRKINRTPHSRWYEGRPVMISRNDSTLGLFNGD 496
           +QLLCA+R+GP+GV GLN R+   L + R I+     +WYEGRPV+++RND  LGL NGD
Sbjct: 508 FQLLCAVRKGPWGVEGLNLRITAALRKVRLID--GDEQWYEGRPVLMTRNDYGLGLMNGD 565

Query: 497 IGIAL-----DCG-QGLRVWFQMPD--GSVKSFQPSRLPEHETAWAMTVHKSQGSEFNHA 548
           IGIAL     D G Q LRV F   D  G V+   PSRL + ET +AMTVHKSQGSEF H 
Sbjct: 566 IGIALKLPESDGGPQVLRVAFPRNDGQGGVRFVLPSRLNDVETVYAMTVHKSQGSEFTHT 625

Query: 549 ALILPTQLSPVITRELIYTAITRARQRLSLYADE-RVLVQAIATRTERRSGL 599
           ALILP  LSPV+T+ELIYT ITRA++  SL      V  +A+  + +R SGL
Sbjct: 626 ALILPDALSPVLTKELIYTGITRAKRWFSLIEPRGGVFEEAVRRKVKRLSGL 677