Pairwise Alignments

Query, 400 a.a., Arabinose efflux permease from Enterobacter asburiae PDN3

Subject, 486 a.a., MFS transporter from Pectobacterium carotovorum WPP14

 Score =  114 bits (284), Expect = 8e-30
 Identities = 105/409 (25%), Positives = 176/409 (43%), Gaps = 71/409 (17%)

Query: 10  VYLLGFFLDLINMFIASVAFPAMAHAFNTTPSALAWVSNGYIAGLTLVIPFSSALTRRIG 69
           +   GFF+  ++  I + A P+MA + N +P  +  V   Y+  + +++P S  L  RIG
Sbjct: 33  IVAFGFFMQTLDTTIVNTALPSMAASLNESPLHMHSVIVSYVLTVAVMLPASGWLADRIG 92

Query: 70  PKRVILLSLFLFSAASAAAGLSATLEGLIAWRVLQGVGGGLLIPVGQALTWQQFKPHERA 129
            K +   ++ LF+  S     S TL  L+  RV+QGVGG +++PVG+ LT  +  P ++ 
Sbjct: 93  VKNIFFTAILLFTLGSLLCARSETLNELLVSRVIQGVGGAMMVPVGR-LTVMKIVPRDQY 151

Query: 130 RLS-SAVMLVALLAPACSPAIGGLLVQTLSWRWIFFATLPVAVV----TFVL-------- 176
             + + V L   + P   PA+GG LV+  SW WIF   LPV ++    T+ L        
Sbjct: 152 MAAMTFVTLPGQIGPLMGPALGGFLVEYASWHWIFLINLPVGIIGALATWFLMPNYTMRT 211

Query: 177 ------ACLWLKHEMPAMKAARLLNLSLLADPLLRFSMLVY------------------- 211
                   LWL   M  +  A   N SL   P+  F+++                     
Sbjct: 212 QRFDISGFLWLAVGMATLTLALDGNRSLGIPPIAIFALIAVGLIALLSYWLHARHNKRAL 271

Query: 212 ------------ICVPGMFIGVNVTGM------FYLQHVANMSPAATGMLMLPWSMASFI 253
                       I + G  +    +GM       +LQ     SP   G++M+P  + S  
Sbjct: 272 FNLHLFDTSTFSIGLTGGLLARIGSGMLPFMTPLFLQLGMGFSPFHAGLMMVPMVLGSMG 331

Query: 254 AITATGRYFNRIGPRPLIVIGCLLQA--TGILLLINVSS-ATLLPAVAFTLMGAGGSLCS 310
                 +  NR+G R +++I  LL A  T +  L+ +     ++P V F L    G++  
Sbjct: 332 MKRIVVQVVNRLGYRRVLIISTLLLALITALFALVALMKWIWMIPIVLFFL----GTV-- 385

Query: 311 STAQSSAFLTTRREEMPD-----ASALWNLNRQLSFFAGALLLAQALNL 354
           +  + S   T   +++PD      ++L ++  QLS   G  +    L +
Sbjct: 386 NAVRFSTMNTLTLKDLPDTLASGGNSLLSMTMQLSTSLGVSIAGILLGM 434



 Score = 32.3 bits (72), Expect = 3e-05
 Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 9/137 (6%)

Query: 234 NMSPAATGMLMLPWSMASFIAITATGRYFNRIGPRPLIVIGCLLQATGILLLINVSSATL 293
           N SP     +++ + +   + + A+G   +RIG + +     LL   G LL     +   
Sbjct: 60  NESPLHMHSVIVSYVLTVAVMLPASGWLADRIGVKNIFFTAILLFTLGSLLCARSETLNE 119

Query: 294 LPAVAFTLMGAGGSLCSSTAQSSAFLTTRREEMPDASALWNLNRQLSFFAGALLLAQALN 353
           L  V+  + G GG++     + +      R++   A     L  Q+    G  L      
Sbjct: 120 L-LVSRVIQGVGGAMMVPVGRLTVMKIVPRDQYMAAMTFVTLPGQIGPLMGPAL------ 172

Query: 354 LAQAWLTPLAAWHGMFI 370
               +L   A+WH +F+
Sbjct: 173 --GGFLVEYASWHWIFL 187