Pairwise Alignments

Query, 853 a.a., DNA mismatch repair protein MutS from Enterobacter asburiae PDN3

Subject, 857 a.a., DNA mismatch repair protein MutS from Pseudomonas putida KT2440

 Score =  970 bits (2508), Expect = 0.0
 Identities = 508/858 (59%), Positives = 630/858 (73%), Gaps = 9/858 (1%)

Query: 4   IDNFDAHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAG 63
           + +  AHTPMMQQY KLK QHP+ L+FYRMGDFYE+FY+DAK+A++LLDI+LT RG SAG
Sbjct: 1   MSDLSAHTPMMQQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAG 60

Query: 64  EPIPMAGIPHHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEA 123
           + IPM GIP H++E YLAKLV  GESV ICEQIGDPATSKGPVER+VVRI+TPGT+SDEA
Sbjct: 61  QSIPMCGIPFHSLEGYLAKLVKLGESVVICEQIGDPATSKGPVERQVVRIITPGTVSDEA 120

Query: 124 LLQERQDNLLAALWQDGKGFGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLYAED 183
           LL ER+DNL+AAL  D + FG A LDI+SG F + E    E + AEL+R NP ELL  +D
Sbjct: 121 LLDERRDNLIAALLGDERLFGLAVLDITSGNFSVQEIKGWENLLAELERLNPVELLIPDD 180

Query: 184 FAEMALIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLIGFGVENAPRGLCAAGCLLQY 243
           +      E R G RRR  W+F+ D+AR+ L  QF T+DL GFG +     + AAGCLL Y
Sbjct: 181 WPRDLPAEKRPGARRRAPWDFDRDSARKALCQQFATKDLKGFGCDKLTLAIGAAGCLLTY 240

Query: 244 VKDTQRTALPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGVENTLASVLDSTVTPMG 303
            K+TQRTALPH+RS+  ER  D++I+D A+RRNLE+  NLAGG +NTL SV+D   T M 
Sbjct: 241 AKETQRTALPHLRSLRHERLDDTVILDGASRRNLELDINLAGGRDNTLQSVIDRCQTAMA 300

Query: 304 SRMLKRWLHMPIRNTETLVCRQQTIAALQD--RYTELQPVLRQVGDLERILARLALRTAR 361
           SR+L RWL+ P+R+ + L  RQ +I  L D  R+ +LQP L+++GD+ERILAR+ LR AR
Sbjct: 301 SRLLSRWLNRPLRDLKVLQARQDSIRCLLDSYRFEKLQPQLKEIGDIERILARIGLRNAR 360

Query: 362 PRDLARMRHAFQQLPELRTQLSDVDSAPVQTLRETMGEFTELRELLERAIIDAPPVLVRD 421
           PRDLAR+R A   LPEL+  ++++++  +  L    G + EL  LLERAIID PP ++RD
Sbjct: 361 PRDLARLRDALGALPELQNAMTELEAPHLARLAAITGTYPELASLLERAIIDNPPAVIRD 420

Query: 422 GGVIAPGYNEELDEWRALADGATDYLDKLEIRERERLGLDTLKVGYNAVHGYYIQISRGQ 481
           GGV+  GY+ ELDE  A+++ A  +L  LE RE+ R GL  LKVGYN VHGY+I++   Q
Sbjct: 421 GGVLKAGYDNELDELLAISENAGQFLIDLEAREKARTGLANLKVGYNRVHGYFIELPTKQ 480

Query: 482 SHLAPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDMLMPHLGD 541
           +  AP  Y+RRQTLK AER+I PELK +EDK L++K +ALA EK LYD L + L+ HL  
Sbjct: 481 AEQAPGDYIRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYDALLETLISHLAP 540

Query: 542 LQQSASALAELDVLVNLAERAETLNYTCPTFTDKPGIRITEGRHPVVEQVLNEPFIANPL 601
           LQ SA+ALAELDVL NLAERA  L+  CP F D+P +RI +GRHPVVEQVL  PF+AN L
Sbjct: 541 LQDSAAALAELDVLSNLAERALNLDLNCPRFVDEPCLRIEQGRHPVVEQVLTTPFVANDL 600

Query: 602 SLSPQRRMLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAQNVEIGPIDRIFTRVGAAD 661
            L    RMLIITGPNMGGKSTYMRQTALI LLA+IGS+VPA + E+  +DRIFTR+G++D
Sbjct: 601 GLDNSTRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSD 660

Query: 662 DLASGRSTFMVEMTETANILHNATEHSLVLMDEVGRGTSTYDGLSLAWACAESLANKIKA 721
           DLA GRSTFMVEM+ETANILHNAT+ SLVLMDEVGRGTST+DGLSLAWA AE LA +++A
Sbjct: 661 DLAGGRSTFMVEMSETANILHNATDRSLVLMDEVGRGTSTFDGLSLAWAAAERLA-QLRA 719

Query: 722 MTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHTVQDGAASKSYGLAVAALAGV 781
            TLFATHYFELT LPE    VANVHL+A EH + I F+H V  G AS+SYGLAVA LAGV
Sbjct: 720 YTLFATHYFELTVLPESEPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGV 779

Query: 782 PKEVIKRARQKLRELESLSPNAAATQIDGTQMSLLVP------AEETSPAVGALENLDPD 835
           P  VI+RAR+ L  LE+ S           + +  VP      A    PA+  L  L  D
Sbjct: 780 PTAVIQRAREHLGRLETTSLPHEQPAAHKAKDAPQVPHQSDLFASLPHPAIEKLGKLQLD 839

Query: 836 SLTPRQALEWIYRLKSLV 853
            +TPRQA+E +Y+LK+L+
Sbjct: 840 DMTPRQAIEMLYQLKNLL 857