Pairwise Alignments

Query, 566 a.a., ABC-type uncharacterized transport system, periplasmic component from Enterobacter asburiae PDN3

Subject, 511 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 50.8 bits (120), Expect = 1e-10
 Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 17/169 (10%)

Query: 147 LAGQVFSGLTRFNGNSSEPAGDLAHHWDVSDDDLRWHFYIRSTLHWHNGDKIETAQLQRS 206
           +A  +F GLT + G   + A  LA  W+  D+  R  F +R  + +HNG+    A ++ +
Sbjct: 57  VATNIFDGLT-YRGPDLKLAPGLAESWEELDEGKRIRFKLRQNVKFHNGEPFNAAAVKFT 115

Query: 207 LTALL----TLPALRTLFQSVLWIETTHPQCLTFALHQPDYWLPHRLATYCSRLAHPDH- 261
              LL         R+ + ++  ++      +   L  PD  L  +LA Y   +  P + 
Sbjct: 116 FERLLGEQGAKGPQRSNYVAIESVDVIDDYTVDMKLKAPDPVLLTKLAGYGGMIVPPAYI 175

Query: 262 ----------PAVGSGPFRLAAFEP-DLVRLESHEQYHLSHPLLKAIEY 299
                       VG+G F+  ++ P + ++LE++  Y    P L  +EY
Sbjct: 176 KEKGEDNFNLNPVGTGAFKFVSYAPKNNIKLEANPDYWGGAPKLSELEY 224