Pairwise Alignments

Query, 566 a.a., ABC-type uncharacterized transport system, periplasmic component from Enterobacter asburiae PDN3

Subject, 565 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 44.3 bits (103), Expect = 1e-08
 Identities = 53/191 (27%), Positives = 78/191 (40%), Gaps = 23/191 (12%)

Query: 134 LQPGFLPGRAEQHLAGQVFSGLTR--FNGNSS-EPAGDLAHHWDVSDDDLRWHFYIRSTL 190
           L P  +      ++A ++   L    FNG    EP   LA  W  SDD L   F +R  +
Sbjct: 79  LNPAIVASNGVFYIASKIVEPLAEASFNGKGGLEPR--LATEWQGSDDGLSATFKLREGV 136

Query: 191 HWHNGDKIETAQLQRS-LTALLTLPAL-RTLFQSVLWIETTHPQCLTFALHQPDYWLPHR 248
            WH+G    +A +  S L+    L  L R +F ++  +ET +     F   +P  +   R
Sbjct: 137 TWHDGKPFTSADVAFSALSVWKPLQNLGRLVFANLEKVETPNDHTAVFHFSKPTPFQLIR 196

Query: 249 LATYCSRLAHPDH----------PA----VGSGPFRLAAFEP-DLVRLESHEQYHL-SHP 292
            A        P H          PA    VG+GPF  A ++P +  RL  +  Y   + P
Sbjct: 197 NALPVVTSVVPKHLYEGTDIATNPANTKPVGTGPFVFAEYKPGEYYRLTRNPNYWAKNQP 256

Query: 293 LLKAIEYWITP 303
            L  I Y + P
Sbjct: 257 QLDEIIYRVLP 267