Pairwise Alignments

Query, 234 a.a., ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component from Enterobacter asburiae PDN3

Subject, 329 a.a., putative D,D-dipeptide transport ATP-binding protein DdpF from Pseudomonas sp. RS175

 Score =  181 bits (460), Expect = 1e-50
 Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 5/212 (2%)

Query: 18  AVSAASFAIEKGETFSLIGESGCGKSTILRVLAGLQREWNGRISILGDALRPGRRFEGEL 77
           AV   S  + +GET  L+GESGCGKST+ ++L GL    +G + + G  L    R   E+
Sbjct: 31  AVDGVSLRLMRGETLGLVGESGCGKSTLAKMLLGLLPPTSGDVLVGGKHLAATDR--KEM 88

Query: 78  RRNVQMVFQDPWASLHPNHTISRTLSEPLHIHGETQIAE---KVADALQQVGLSADAGKR 134
            R++Q +FQDP++SL+P  T+   ++ PL +H     AE   K    L  VGL       
Sbjct: 89  SRHIQPIFQDPYSSLNPRKTLREIVTLPLIVHDIGSPAERRKKTEAMLDVVGLPKRVIDS 148

Query: 135 YPHQLSGGQRQRVAIARALALRPQLLLLDEPTSALDMSVQAEILNLLNRLKAEHGMTYLL 194
           YP QLSGGQRQRVAIARAL +RP +L+ DEPTSALD+SVQA+ILNLL  LK E G+TYLL
Sbjct: 149 YPSQLSGGQRQRVAIARALIMRPDVLICDEPTSALDVSVQAQILNLLQDLKHEFGLTYLL 208

Query: 195 VSHDADVIAHMSDRAAFMAHGEIQRVFDREAM 226
           +SH+  VI H++DR A M  G I     REA+
Sbjct: 209 ISHNLAVIEHLADRVAVMYLGRIVEERTREAL 240