Pairwise Alignments

Query, 370 a.a., Spermidine/putrescine-binding periplasmic protein from Enterobacter asburiae PDN3

Subject, 364 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  436 bits (1120), Expect = e-127
 Identities = 213/359 (59%), Positives = 276/359 (76%), Gaps = 2/359 (0%)

Query: 12  LVAGALMAVSAGTLAAEQKTLHVYNWSDYIAPDTVANFEKETGIKVVYDVFDSNEVLEGK 71
           L+A +LM   AG   A+ K LHVYNWSDYIAPDT+ANFEKE+GIKVVYDVFDSNE LE K
Sbjct: 8   LLALSLMGAMAGAAQADDKVLHVYNWSDYIAPDTIANFEKESGIKVVYDVFDSNETLEAK 67

Query: 72  LMAGSTGFDLVVPSASFLERQLTAGVFQPLDKSKLPNWKNLDPEVLKLVAKHDPDNKYAM 131
           L+AG +G+D+VVPS +FL +Q+ AGV+Q LDKSKL N+ NL+  +LK V+  DPDNK+A 
Sbjct: 68  LLAGKSGYDIVVPSNNFLAKQIKAGVYQELDKSKLSNYDNLNKSLLKAVSVSDPDNKHAF 127

Query: 132 PYLWATTGIGYNVDKVKAVLGPDVKLDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVL 191
           PY+W + GIGYN +KVKA LG D K+DSWDV+LKPEN+ KLKSCGVSFLD+P E+    L
Sbjct: 128 PYMWGSIGIGYNPEKVKAALGVD-KIDSWDVLLKPENIAKLKSCGVSFLDSPTEMLPVAL 186

Query: 192 NYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQA 251
           +YLG   ++ K  D    A DL LK+RP+I YFHSS+YI+DLANG+ICVA+G++GD+ QA
Sbjct: 187 HYLGLPTDTQKKADLK-QAEDLFLKIRPSIGYFHSSKYISDLANGNICVAVGYSGDIEQA 245

Query: 252 ANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPEVIAHISDH 311
            +RA EA   V V+Y IPKEGA +FFD+ A+P DA+N D AY+F+NYL++P+V+A I++ 
Sbjct: 246 KSRAAEAGGKVKVAYDIPKEGAGSFFDMVAIPKDAENVDAAYKFMNYLLKPQVMAEITNS 305

Query: 312 VYYANGNKASVPLVSEEIRNNPAIYPPADVFAKLFTLKVQDPKIDRVRTRAWTKVKSGK 370
           V++ NGN+ +  LV +EI ++P IYPPADV AKL+ +        R  TR+WTK+KSGK
Sbjct: 306 VHFPNGNEKATALVDKEITSDPGIYPPADVQAKLYAIADLPAATQREMTRSWTKIKSGK 364