Pairwise Alignments

Query, 317 a.a., ABC-type spermidine/putrescine transport system, permease component I from Enterobacter asburiae PDN3

Subject, 287 a.a., Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  221 bits (564), Expect = 1e-62
 Identities = 116/278 (41%), Positives = 170/278 (61%), Gaps = 15/278 (5%)

Query: 29  RKLVIAMPYVWLILLFLLPFLIVFKISLAEMARAIPPYTNLLDWADGQLTLTLNLGNFLQ 88
           + +VI     WL+L   LP L++   S      A              + +   L N+ +
Sbjct: 8   QNVVIVTIVGWLVLFVFLPNLMIIGTSFLTRDDA------------SFVKMVFTLDNYAR 55

Query: 89  LTDDPLYFEAYLQSLQVAAISTLCCLVMGYPLAWAVAHSKPSTRNILLLLVILPSWTSFL 148
           L D PLYFE  L SL +A I+TL CLV+GYP AW +A      R +LL L+I+P WT+ L
Sbjct: 56  LLD-PLYFEVLLHSLNMALIATLSCLVLGYPFAWFLAKLPEKIRPLLLFLLIVPFWTNSL 114

Query: 149 IRVYAWMGILKNNGVLNNFLMWLGVIDQPLTILHTNLAVYIGIVYAYLPFMVLPIYTALT 208
           IR+Y     L   G LN FL+WLGVID P+ I+ T  AV IG+VY  LPFMV+P+Y+++ 
Sbjct: 115 IRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYILLPFMVMPLYSSIE 174

Query: 209 RIDYSLVEASLDLGARPLKTFFSVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSI 268
           ++D  L+EA+ DLGA  ++TF  +I+PLT  GI+AG +LV +PA+G F + +L+GG  ++
Sbjct: 175 KLDKPLLEAARDLGASKMQTFIRIIIPLTMPGIVAGCLLVMLPAMGLFYVSDLMGGAKNL 234

Query: 269 MIGRVLWQEFFNNRDWPVASAVAIVMLLL--LIVPIMW 304
           +IG V+  +F N RDWP  +A +I + ++  L++ I W
Sbjct: 235 LIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLIYW 272