Pairwise Alignments

Query, 263 a.a., ABC-type nitrate/sulfonate/bicarbonate transport system, permease component from Enterobacter asburiae PDN3

Subject, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  154 bits (390), Expect = 1e-42
 Identities = 85/239 (35%), Positives = 130/239 (54%), Gaps = 7/239 (2%)

Query: 1   MSAPSQKWLLRAAPWFLPVGIVALWQLASST----GWLSSRILPSPEGVVEAFWSLSVSG 56
           M+   ++W +R A     +  +  WQ+A++     G L+   +P+P+ V++A W L  S 
Sbjct: 1   MTRNLKRWPVRLASL---LACLLFWQVAANVKMDLGLLTFTYVPTPKAVLDAAWQLLTSS 57

Query: 57  ELWQHLAISSWRAVIGFSIGGSIGLVLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLV 116
            L  HL  S  R   G++    +G+ LGL+ G S+W E  L   +++LR +P +A IPL 
Sbjct: 58  TLLAHLGSSLARVFAGYATAALVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVAWIPLA 117

Query: 117 ILWFGIDESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFSLFIHVILPG 176
           IL F   E + +F+   G LFPI +NT HG+  +D  LV  ARS G   +++   V+LPG
Sbjct: 118 ILMFPSSELSMVFITFTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPG 177

Query: 177 ALPSIMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYALLG 235
           ALPSI+ G+   +G  W  L+ AE IS   GIGY    +        +VV ++L  +LG
Sbjct: 178 ALPSIVTGLAIGMGTSWFCLVTAEMISGQFGIGYYTWESYTLQNYPDIVVGMLLIGVLG 236