Pairwise Alignments

Query, 351 a.a., Outer membrane protein and related peptidoglycan-associated (lipo)proteins from Enterobacter asburiae PDN3

Subject, 208 a.a., Nonspecific porin and structural outer membrane protein OprF from Pseudomonas sp. S08-1

 Score = 74.7 bits (182), Expect = 2e-18
 Identities = 53/143 (37%), Positives = 76/143 (53%), Gaps = 17/143 (11%)

Query: 199 EEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDG 258
           EE        P PA  V+     ++ DV F+F+KA +K E Q  +  L   +S       
Sbjct: 79  EETVVEETVTPEPAEPVR-----VELDVKFDFDKAAVKAESQGDIKALADFMSQYPST-- 131

Query: 259 SVVVLGFTDRIGSDAYNQKLSEKRAQSVVDYLISK-GIPANKISPRGMGESNPVTGNTCD 317
           S VV G TD +G+DAYNQ LSE+RA +V D L+++ G+  +++S  G GES PV  N+  
Sbjct: 132 STVVEGHTDSVGTDAYNQGLSERRANAVRDVLVNQYGVGGDRVSSVGYGESRPVADNSTS 191

Query: 318 NVKARAALIDCLAPDRRVEIEVK 340
             +         A +RRVE EV+
Sbjct: 192 EGR---------AINRRVEAEVE 205