Pairwise Alignments

Query, 684 a.a., Superfamily I DNA and RNA helicases from Enterobacter asburiae PDN3

Subject, 684 a.a., DNA helicase IV (NCBI) from Escherichia coli BW25113

 Score = 1150 bits (2974), Expect = 0.0
 Identities = 561/684 (82%), Positives = 618/684 (90%)

Query: 1   MELKATSLGKRLAQHPYDRVVLLNAGVKVSGERHEYLIPFNQLLAIHCKRGLVWGELEFV 60
           MELKAT+LGKRLAQHPYDR V+LNAG+KVSG+RHEYLIPFNQLLAIHCKRGLVWGELEFV
Sbjct: 1   MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFV 60

Query: 61  LPDDKVVRLHGTEWAETQRFHHHLNALWQQWSQDMSVIAAQVLQQVLDDIAQSNAQHAWL 120
           LPD+KVVRLHGTEW ETQRF+HHL+A W++WS +MS IA+ VL+Q LD IA    ++ WL
Sbjct: 61  LPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWL 120

Query: 121 TRQQTAGLQQKIRQALSALPFSVTRLDEFDNCRDAWHQCQAWLNDKDKSRLAHNQAWTDA 180
           TR+QT+G+QQ+IRQALSALP  V RL+EFDNCR+AW +CQAWL D + +RL HNQA+T+A
Sbjct: 121 TREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEA 180

Query: 181 MLTQYADFFSTVESSPLNPAQARAVVNGEQSLLVLAGAGSGKTSVLVARAGWLLTTGEAV 240
           MLT+YADFF  VESSPLNPAQARAVVNGE SLLVLAGAGSGKTSVLVARAGWLL  GEA 
Sbjct: 181 MLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS 240

Query: 241 ADQILLLAFGRKAAQEMDERIQERLHTRDITARTFHALALHIIQQGSKKVPSISKLENDA 300
            +QILLLAFGRKAA+EMDERI+ERLHT DITARTFHALALHIIQQGSKKVP +SKLEND 
Sbjct: 241 PEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT 300

Query: 301 QARQALFIKTWRQQCSEKKAQAKGWRQWLEEELSWEVPEGSFWQDDKLARRLGSRLDRWV 360
            AR  LFI  WR+QCSEKKAQAKGWRQWL EE+ W VPEG+FW D+KL RRL SRLDRWV
Sbjct: 301 AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWV 360

Query: 361 SLMRMHGGTQAEMIESAPEAIRDLFSKRVKLMAPLLKAWKTALKEENAVDFSGLIHQAII 420
           SLMRMHGG QAEMI SAPE IRDLFSKR+KLMAPLLKAWK ALK ENAVDFSGLIHQAI+
Sbjct: 361 SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIV 420

Query: 421 ILEKGRFVSPWKHILVDEFQDISPQRAALLSALRAQNKHTSLFAVGDDWQAIYRFSGAQL 480
           ILEKGRF+SPWKHILVDEFQDISPQRAALL+ALR QN  T+LFAVGDDWQAIYRFSGAQ+
Sbjct: 421 ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM 480

Query: 481 SLTTAFHHYFGEGERSDLDTTYRFNSRIGEIANRFIQQNPHQLAKPLNSLRPGDKKAVTL 540
           SLTTAFH  FGEGER DLDTTYRFNSRIGE+ANRFIQQNP QL KPLNSL  GDKKAVTL
Sbjct: 481 SLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTL 540

Query: 541 LADDQLEPLLDKLSGYAKPDERILVLARYHHLKPAALEKAATRWPKLQLEFMTIHASKGQ 600
           L + QL+ LLDKLSGYAKP+ERIL+LARYHH++PA+LEKAATRWPKLQ++FMTIHASKGQ
Sbjct: 541 LDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ 600

Query: 601 QADYVIVVGLKEGSDGFPAPARESVMEEALLPVPEDFPDAEERRLLYVALTRARHRVWLL 660
           QADYVI+VGL+EGSDGFPA ARES+MEEALLP  EDFPDAEERRL+YVALTRARHRVW L
Sbjct: 601 QADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWAL 660

Query: 661 FNKEEPSAFVDILKSIDVPVARKP 684
           FNKE PS FV+ILK++DVPVARKP
Sbjct: 661 FNKENPSPFVEILKNLDVPVARKP 684