Pairwise Alignments

Query, 405 a.a., Arabinose efflux permease from Enterobacter asburiae PDN3

Subject, 403 a.a., Multidrug-efflux transporter, major facilitator superfamily (MFS) (TC 2.A.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  468 bits (1203), Expect = e-136
 Identities = 233/381 (61%), Positives = 290/381 (76%), Gaps = 1/381 (0%)

Query: 9   NWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAMA 68
           +WK NL   W GCF TG A S ++PFLPLY+ QLGV+ H AL+MWSGL FSITFL SA+ 
Sbjct: 3   SWKVNLISVWFGCFFTGLAISQILPFLPLYISQLGVSSHEALSMWSGLTFSITFLISAIV 62

Query: 69  SPFWGGLADRKGRKIMLLRSALGMAIIMALMGVAQNVWQFLILRALLGLLGGFIPNANAL 128
           SP WG LADRKGRK+MLLR++LGMAI + L   A +VWQ  +LR ++GL  G+IPNA AL
Sbjct: 63  SPMWGSLADRKGRKLMLLRASLGMAIAILLQAFATHVWQLFLLRGIMGLTSGYIPNAMAL 122

Query: 129 IATQIPRHKSGWALGTLSTGGVSGALLGPLAGGLLADNYGLRPVFFITASVLFLCFIVTL 188
           +A+Q+PR +SGWAL TLST  +SG + GPL GG +AD+ GLR VF ITA +L + F+VTL
Sbjct: 123 VASQVPRERSGWALSTLSTAQISGVIGGPLMGGFVADHIGLRAVFLITAMLLVVSFLVTL 182

Query: 189 LCIRENFTPVAKK-EMLHAREVLTSLKNPRLVLSLFVTTMIIQVATGSIAPILTLYVRDL 247
             I+E   PV KK E L  + V  SL  P LV+SLF TTM+IQ+  GSI+PIL L+++ +
Sbjct: 183 FLIKEGVRPVIKKSERLSGKAVFASLPYPALVISLFFTTMVIQLCNGSISPILALFIKSM 242

Query: 248 AGNVSNIAFISGLIASVPGVAALLSAPRLGKLGDRVGPEKILICALVISVLLLIPMSMVQ 307
             + +NIAF+SGLIASVPG++AL+SAPRLGKLGDR+G E+IL+  L+ +VLL   MS V 
Sbjct: 243 MPDSNNIAFLSGLIASVPGISALISAPRLGKLGDRIGTERILMATLICAVLLFFAMSWVT 302

Query: 308 TPWQLGVLRFLLGAADGALLPAVQTLLVYNSTNQIAGRIFSYNQSFRDIGNVTGPLLGAG 367
           TP+QLG+LRFLLG ADGA+LPAVQTLLV  S++QI GRIF YNQSF  +GNV GPL+GA 
Sbjct: 303 TPFQLGLLRFLLGFADGAMLPAVQTLLVKYSSDQITGRIFGYNQSFMYLGNVVGPLMGAT 362

Query: 368 ISASFGFRAVFIVTAGVVLFN 388
           +SA  GFR VFI TA +VL N
Sbjct: 363 VSAMAGFRWVFIATAAIVLIN 383



 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 47/186 (25%), Positives = 92/186 (49%), Gaps = 2/186 (1%)

Query: 219 VLSLFVTTMIIQVATGSIAPILTLYVRDLA-GNVSNIAFISGLIASVPGVAALLSAPRLG 277
           ++S++       +A   I P L LY+  L   +   ++  SGL  S+  + + + +P  G
Sbjct: 8   LISVWFGCFFTGLAISQILPFLPLYISQLGVSSHEALSMWSGLTFSITFLISAIVSPMWG 67

Query: 278 KLGDRVGPEKILICALVISVLLLIPMSMVQTPWQLGVLRFLLGAADGALLPAVQTLLVYN 337
            L DR G + +L+ A +   + ++  +     WQL +LR ++G   G  +P    L+   
Sbjct: 68  SLADRKGRKLMLLRASLGMAIAILLQAFATHVWQLFLLRGIMGLTSG-YIPNAMALVASQ 126

Query: 338 STNQIAGRIFSYNQSFRDIGNVTGPLLGAGISASFGFRAVFIVTAGVVLFNAIYSWFSLS 397
              + +G   S   + +  G + GPL+G  ++   G RAVF++TA +++ + + + F + 
Sbjct: 127 VPRERSGWALSTLSTAQISGVIGGPLMGGFVADHIGLRAVFLITAMLLVVSFLVTLFLIK 186

Query: 398 RALRPV 403
             +RPV
Sbjct: 187 EGVRPV 192