Pairwise Alignments

Query, 405 a.a., Arabinose efflux permease from Enterobacter asburiae PDN3

Subject, 408 a.a., putative drug efflux system protein from Escherichia coli BL21

 Score =  704 bits (1818), Expect = 0.0
 Identities = 354/404 (87%), Positives = 382/404 (94%), Gaps = 2/404 (0%)

Query: 1   MSP--SDAPINWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVF 58
           MSP  +D PINWKRNL VAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSG+VF
Sbjct: 1   MSPCENDTPINWKRNLIVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGIVF 60

Query: 59  SITFLFSAMASPFWGGLADRKGRKIMLLRSALGMAIIMALMGVAQNVWQFLILRALLGLL 118
           SITFLFSA+ASPFWGGLADRKGRK+MLLRSALGM I+M LMG+AQN+WQFLILRALLGLL
Sbjct: 61  SITFLFSAIASPFWGGLADRKGRKLMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLL 120

Query: 119 GGFIPNANALIATQIPRHKSGWALGTLSTGGVSGALLGPLAGGLLADNYGLRPVFFITAS 178
           GGF+PNANALIATQ+PR+KSGWALGTLSTGGVSGALLGP+AGGLLAD+YGLRPVFFITAS
Sbjct: 121 GGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPMAGGLLADSYGLRPVFFITAS 180

Query: 179 VLFLCFIVTLLCIRENFTPVAKKEMLHAREVLTSLKNPRLVLSLFVTTMIIQVATGSIAP 238
           VL LCF VTL CIRE F PV+KKEMLH REV+TSLKNP+LVLSLFVTT+IIQVATGSIAP
Sbjct: 181 VLILCFFVTLFCIREKFQPVSKKEMLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAP 240

Query: 239 ILTLYVRDLAGNVSNIAFISGLIASVPGVAALLSAPRLGKLGDRVGPEKILICALVISVL 298
           ILTLYVR+LAGNVSN+AFISG+IASVPGVAALLSAPRLGKLGDR+GPEKILI AL+ SVL
Sbjct: 241 ILTLYVRELAGNVSNVAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVL 300

Query: 299 LLIPMSMVQTPWQLGVLRFLLGAADGALLPAVQTLLVYNSTNQIAGRIFSYNQSFRDIGN 358
           LLIPMS VQTP QLG+LRFLLGAADGALLPAVQTLLVYNS+NQIAGRIFSYNQSFRDIGN
Sbjct: 301 LLIPMSYVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGN 360

Query: 359 VTGPLLGAGISASFGFRAVFIVTAGVVLFNAIYSWFSLSRALRP 402
           VTGPL+GA ISA++GFRAVF+VTAGVVLFNA+YSW SL R   P
Sbjct: 361 VTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRRRRIP 404



 Score = 68.6 bits (166), Expect = 3e-16
 Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 2/196 (1%)

Query: 211 TSLKNPRLVLSLFVTTMIIQVATGSIAPILTLYVRDLA-GNVSNIAFISGLIASVPGVAA 269
           T +   R ++  ++   +   A   + P L LYV  L     S +   SG++ S+  + +
Sbjct: 8   TPINWKRNLIVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGIVFSITFLFS 67

Query: 270 LLSAPRLGKLGDRVGPEKILICALVISVLLLIPMSMVQTPWQLGVLRFLLGAADGALLPA 329
            +++P  G L DR G + +L+ + +   ++++ M + Q  WQ  +LR LLG   G  +P 
Sbjct: 68  AIASPFWGGLADRKGRKLMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLL-GGFVPN 126

Query: 330 VQTLLVYNSTNQIAGRIFSYNQSFRDIGNVTGPLLGAGISASFGFRAVFIVTAGVVLFNA 389
              L+        +G       +    G + GP+ G  ++ S+G R VF +TA V++   
Sbjct: 127 ANALIATQVPRNKSGWALGTLSTGGVSGALLGPMAGGLLADSYGLRPVFFITASVLILCF 186

Query: 390 IYSWFSLSRALRPVTE 405
             + F +    +PV++
Sbjct: 187 FVTLFCIREKFQPVSK 202