Pairwise Alignments

Query, 268 a.a., exodeoxyribonuclease III from Enterobacter asburiae PDN3

Subject, 270 a.a., exodeoxyribonuclease III / apurinic/apyrimidinic endodeoxyribonuclease VI from Pseudomonas putida KT2440

 Score =  382 bits (981), Expect = e-111
 Identities = 179/266 (67%), Positives = 211/266 (79%), Gaps = 3/266 (1%)

Query: 1   MKFVSFNINGLRARPHQLEAIVEQHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60
           MK V FNINGLRARPHQL A++E+HQPDVIGLQETKV DD FPL +V  LGY+V YHGQK
Sbjct: 1   MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK 60

Query: 61  GHYGVALLTKETPVSVRRGFPGDDEEAQRRIIMAELPSPLGN-ITVINGYFPQGESRDHP 119
           GHYGVALL+++ P+S+ +GF  D+E+AQRR I        G+ IT++NGYFPQGESRDHP
Sbjct: 61  GHYGVALLSRQPPLSLHKGFATDEEDAQRRFIWGTFADANGSPITIMNGYFPQGESRDHP 120

Query: 120 TKFPAKAKFYQDLQNYLTTELNKDNPVLIMGDVNISPTDLDIGIGEDSRKRWLRTGKCSF 179
           TKFPAK +FY DLQ  L ++   D PVL+MGD+NISP D DIGIG D+ KRWL+TGKCSF
Sbjct: 121 TKFPAKQRFYSDLQALLESQFRNDQPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSF 180

Query: 180 LPEEREWMQRLLDWGLVDTFRTANPDTQDRFSWFDYRSKGFDD--NRGLRIDLLLASSPL 237
           LPEEREWM+RL  WGLVD+FR   PD  DRFSWFDYRS+GF+D   RGLRIDL++AS  L
Sbjct: 181 LPEEREWMERLKGWGLVDSFRHLYPDVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQQL 240

Query: 238 AERCIETGIDYEIRSMEKPSDHAPVW 263
             R    G+DYE+R MEKPSDHAP+W
Sbjct: 241 VPRIKAAGVDYELRGMEKPSDHAPIW 266