Pairwise Alignments

Query, 268 a.a., exodeoxyribonuclease III from Enterobacter asburiae PDN3

Subject, 258 a.a., Exodeoxyribonuclease III (EC 3.1.11.2) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  145 bits (367), Expect = 6e-40
 Identities = 94/266 (35%), Positives = 137/266 (51%), Gaps = 17/266 (6%)

Query: 1   MKFVSFNINGLRARPHQLEAIVEQHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60
           MK  ++NIN L  R  Q+   +  +  D +GLQE K+ D+ FP + + + GY+    GQK
Sbjct: 1   MKLATWNINSLSVRLPQVLDWLAANPVDALGLQELKLVDEKFPHDALKEAGYHAAVFGQK 60

Query: 61  GHYGVALLTKETPVSVRRGFPGDDEEAQRRIIMAELPSPLGNITVINGYFPQGESRDHPT 120
            + GVA+L++     V R  P   +E Q R+I A L +P G + ++N YF  G++     
Sbjct: 61  TYNGVAILSRTPLTDVVRNIPNHADE-QSRVIAATLDTPEGPLRMVNCYFVNGQA-PGSE 118

Query: 121 KFPAKAKFYQDLQNYLTTELNKDNPVLIMGDVNISPTDLD----IGIGEDSRKRWLRTGK 176
           KF  K  + + L  +L  EL     ++++GD N++P D D    +G+ +           
Sbjct: 119 KFAYKMLWLEALHRWLQEELKVHQRLVLLGDFNVAPEDRDSFDPVGLKD----------T 168

Query: 177 CSFLPEEREWMQRLLDWGLVDTFRTANPDTQDRFSWFDYRSKGFDDNRGLRIDLLLASSP 236
                EER   Q LLD GL D +R      +  +SW+DYR  GF  NRGLRID +L S  
Sbjct: 169 IHHTVEERAHFQALLDLGLTDAYRLFE-QPEKSYSWWDYRMLGFQKNRGLRIDHILVSGA 227

Query: 237 LAERCIETGIDYEIRSMEKPSDHAPV 262
           L +R     ID   R   +PSDHAPV
Sbjct: 228 LRDRVTACHIDRLPRKNPQPSDHAPV 253