Pairwise Alignments

Query, 301 a.a., GIY-YIG catalytic domain from Enterobacter asburiae PDN3

Subject, 302 a.a., Excinuclease cho (excinuclease ABC alternative C subunit) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  451 bits (1159), Expect = e-131
 Identities = 219/296 (73%), Positives = 250/296 (84%)

Query: 1   MSEQYMEQYVSRRQSAPRLEFEAAAIYEYPEHLRPWLEALPKQPGVYIFHGESDTLPLYI 60
           M+ Q  E  V RRQSAPRLEFEAAAIYEYPEHLRP+L   P  PGVYIFH ESDTLPLYI
Sbjct: 1   MNNQLTEITVVRRQSAPRLEFEAAAIYEYPEHLRPFLSEAPALPGVYIFHSESDTLPLYI 60

Query: 61  GKSVNIRSRVLSHLRTPDEAAMLRQSRRITWFQTAGEMGALLLEARLIKEQQPLFNKRLR 120
           GKSVNIRSRVLSHLRTPDEA MLRQ+RRI+W  TAGEMGALLLEARLIKEQQPLFNKRLR
Sbjct: 61  GKSVNIRSRVLSHLRTPDEATMLRQARRISWICTAGEMGALLLEARLIKEQQPLFNKRLR 120

Query: 121 RNRQLCSLQINNGKPQVVYARDVDFSHAPNLYGLFANKRAALQALQTLADDLQLCYSLLG 180
           RNRQLCSLQ++  K +VV AR VDFSH PNL+GLFAN+RAALQ+LQ LAD+ +LCY LLG
Sbjct: 121 RNRQLCSLQLSEQKIEVVSARSVDFSHEPNLFGLFANRRAALQSLQNLADEQKLCYGLLG 180

Query: 181 LEATTRGRACFRSALKRCAGACCGKESVEAHHARLLTGLAAISVNCWPWESAVALKEVGE 240
           LE  +RGRACFR ALKRCAGACCG+E+ +AH  RL   L  + V CWPW+ A+ALKE   
Sbjct: 181 LEPVSRGRACFRFALKRCAGACCGQETPQAHFLRLQASLERLRVVCWPWKGAIALKESRP 240

Query: 241 AMTQYHIVNNWLWLGAVDDINDAATLLRTPAGFDHDGYKILCKPVLAGKFEIIVLN 296
            MTQ+HI+NNWLWLGAV  +++AATL+RTPAGFD DGYKILCKP+++G++EII L+
Sbjct: 241 QMTQFHIINNWLWLGAVPSLDEAATLVRTPAGFDQDGYKILCKPLMSGQYEIIELH 296