Pairwise Alignments

Query, 479 a.a., diguanylate cyclase (GGDEF) domain from Enterobacter asburiae PDN3

Subject, 269 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score =  100 bits (250), Expect = 5e-26
 Identities = 78/244 (31%), Positives = 123/244 (50%), Gaps = 26/244 (10%)

Query: 227 VRYSLPATCLLTFITGATEIILVANSVINIA---VATPFTTPMMFSARLGIA-----TMA 278
           + +S+   CL+T I     I++    +  +A   + T     +M S  LG A     T+ 
Sbjct: 29  LEFSVRIACLVTLIV----IVMCTGGLTLLAQFGLVTDLFNGIMLSVTLGGAVAFTVTLL 84

Query: 279 ICPVMVSVSMAAINSLIRQVSLRADYDFLTHVYSRSGLYEALKHEETYRHTRFLTVMLLD 338
           +C +        + S  R + L +  D LT + +R GLY A     +        V  LD
Sbjct: 85  VCWLNAREVQILVQSHERFLHL-SHTDALTGLSNRLGLYAACAELGSD-----YCVAFLD 138

Query: 339 IDYFKSINDNYGHECGDRVLASFARQVQQVVGEDGMVARMGGEEFAVVVNSGDAQHGFEL 398
           ID+FK++ND Y H  GD V+AS AR++++       VAR+GGEEF VV  +       ++
Sbjct: 139 IDHFKAVNDGYSHLVGDLVIASVARRIKEHFDPPAHVARLGGEEFVVVQETSPLAF-LQM 197

Query: 399 AERIRSTVASHPFTWRHQTLYLTVSIGLG-SGKAEPWQLTEVFNKLMAEADDHLYRSKKA 457
            ER+R+ + + P  ++   + +T+SIG+   G A      E+F+K+M  AD  LYR+K  
Sbjct: 198 CERVRAAIETTPVAYQDLRITVTISIGVAFRGDA------EIFDKVMHNADLALYRAKGG 251

Query: 458 GRNR 461
           GRNR
Sbjct: 252 GRNR 255