Pairwise Alignments

Query, 511 a.a., PAS domain S-box from Enterobacter asburiae PDN3

Subject, 506 a.a., aerotaxis sensor receptor Aer from Escherichia coli ECRC101

 Score =  358 bits (919), Expect = e-103
 Identities = 202/506 (39%), Positives = 299/506 (59%), Gaps = 12/506 (2%)

Query: 7   VTQNEYLLNDGSTLMSTTDTKSHITYANSAFIEASGYKEEHLLGEPHNLIRHPDMPAEAF 66
           VTQ    L D +TLMSTTD +S+IT+AN  F++ SG+  + L G+PHN++RHPDMP  AF
Sbjct: 7   VTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFTLQELQGQPHNMVRHPDMPKAAF 66

Query: 67  GDMWFTLQQGETWTGLVKNRRHNGDHYWVRANVTPVWQGGSLTGYISVRNIPAREEIAAS 126
            DMWFTL++GE W+G+VKNRR NGDHYWVRAN  P+ + G ++GY+S+R     EEIAA 
Sbjct: 67  ADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPMVREGKISGYMSIRTRATDEEIAAV 126

Query: 127 EKLYAKVRNNELKHYRFYKGLLVRRGLFSFMSLFKCLSTSKRIHLGIATTALLSCLAVYL 186
           E LY K  N      R +KGL+VR+G      L K  S   R       T +   LA  L
Sbjct: 127 EPLY-KALNAGRTGKRIHKGLVVRKGW-----LGKLPSLPLRWRARGVMTLMFILLAAML 180

Query: 187 F----PDKLVQSGSLVLLFTSLAYYLHAQIARPVKSIVQQMQSVVSGRKTDYYHFDRIDD 242
           +    P       +LV+L  S  +    QI RP++++ +Q   V +G +    H +R D+
Sbjct: 181 WFVAAPVVTYILCALVVLLASACF--EWQIVRPIENVARQALKVATGERNSVEHLNRSDE 238

Query: 243 IGLMMRLVNQSGLNLNSLVDDVGAQISGIGTISQQVAKEGAALQTRSEETADFLQQTASA 302
           +GL +R V Q GL    L++DV +Q+S +   S+ +AK    L   +++T D +QQT + 
Sbjct: 239 LGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAKGTDELNEHTQQTVDNVQQTVAT 298

Query: 303 VEEIASAVKQTAETAKEATEMADRTRDSAHRGEAMMKETIGMMQSVSQDNSQIVDIISVI 362
           + ++A++VKQ + TA  A +++    ++A +G   M   I  M  ++    +I  I S+I
Sbjct: 299 MNQMAASVKQNSATASAADKLSITASNAAVQGGEAMTTVIKTMDDIADSTQRIGTITSLI 358

Query: 363 DRIAFQTNILALNAAVEAARAGEAGRGFAVVAAEVRNLAQHSATAAKEIKALIEKNVASV 422
           + IAFQTNILALNAAVEAARAGE G+GFAVVA EVR+LA  SA AA +I+ LI+ +   V
Sbjct: 359 NDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSANAANDIRKLIDASADKV 418

Query: 423 NAGVEKVEQTETQLTVMIDNVLRVSSLIKEIGHATQEQTQALTLINASISRIGAMTHNNT 482
            +G ++V      +  ++  V  V+ LI +I H+T EQ   L+ +  ++  +  +T  N 
Sbjct: 419 QSGSQQVHAAGRTMEDIVAQVKNVTQLIAQISHSTLEQADGLSSLTRAVDELNLITQKNA 478

Query: 483 GMVDNVTHAANHLTQRTTRLQQAIAV 508
            +V+     +  +  R +RL+ A+ V
Sbjct: 479 ELVEESAQVSAMVKHRASRLEDAVTV 504