Pairwise Alignments

Query, 663 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Enterobacter asburiae PDN3

Subject, 1283 a.a., diguanylate phosphodiesterase from Pseudomonas simiae WCS417

 Score =  350 bits (899), Expect = e-100
 Identities = 204/565 (36%), Positives = 320/565 (56%), Gaps = 16/565 (2%)

Query: 102  VARDLAQ------GLSFAEQVVSEANSVIVILDRHGNIQRFNRLSEEYTGLKEQEVIGQN 155
            V RD++Q       L  A  V   + S I+I D  G I + N      +G    +V+ Q 
Sbjct: 708  VGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSDVLDQL 767

Query: 156  VFKLFMSRSEAAASKRNITGFFRNGSSYEVERWIKTRKGQRLFLFRNKFVHSGSGKNEIF 215
               L +   + A   R +       S++E E W+K R G+    +           +   
Sbjct: 768  PNMLTVDEQQEA-HLRYVLKQLHQHSTWEGEVWLKRRNGEHYPAWVGITAVFDDEGDLAS 826

Query: 216  LICSGTDITEERRAQERLRVLANTDTITGLPNRNAIHDLISDAID--NRGDTQVGVVYLD 273
             +C  +DI+E + +++R+  LA  D +T LPNR    D +  A+    R  + V +++LD
Sbjct: 827  YVCFFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQAAERQKSWVVLMFLD 886

Query: 274  LDNFKKVNDAYGHMFGDQLLQAVALAILSCLDEEQVLARLGGDEFIVMA---TNTSQGSL 330
            LD FK +ND+ GH  GD++L+ +A  +L C+ E+  +AR+GGDEF ++     N      
Sbjct: 887  LDRFKPINDSLGHAAGDRMLKEMATRLLGCVAEDDTVARMGGDEFTLLLQPRVNREMALN 946

Query: 331  EAM--ASRILTRLRQPFRIGLIEIYTGCSLGIALAPQHGNDRESVIRNADTAMYTAKENG 388
             A+  A +IL  L +PF +   E +   S+GIAL+PQ GN+   +++NADTAMY AKE G
Sbjct: 947  RAIHVAEQILASLVKPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERG 1006

Query: 389  RGKFCVFSPEMNQRVFEYLWLDTNLRKALDNDQLLIHYQPKITWRGE-VRSLEALVRWQS 447
            +  F  +  +MN    E L L+++LR AL+ ++ +++YQP+ +  G+ +   EAL+RW+ 
Sbjct: 1007 KNNFQFYQADMNASALERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRH 1066

Query: 448  PERGLIPPLEFISYAEESGLIVPLGRWVMLDVVRQVAKWRDKGINL-RVAVNVSARQLAD 506
            P RGL+PP +FI   EE GL+V +G WV+ +  RQ+  W    + + +V+VN+SARQ +D
Sbjct: 1067 PRRGLVPPGDFIPVLEELGLVVDVGDWVISEACRQLKTWHQNKVRVPKVSVNISARQFSD 1126

Query: 507  QTIFSDLKQALKDLNFEYCPVDVELTESCLIENEELALSVIQQFSRLGAQIHLDDFGTGY 566
              + + +   LKD       +++ELTES L+     A+ ++     LG  I +DDFGTGY
Sbjct: 1127 GQLGTRIATILKDTGLPPACLELELTESILMREVNEAMQILDSLKNLGLSIAVDDFGTGY 1186

Query: 567  SSLSQLARFPIDAIKLDQSFVRDIHKQSISQSLVRAIVAVAQALNLQVIAEGVENAKEDA 626
            SSL+ L +FPID +K+D++FV  +        + RAI+A+A +LNL VIAEGVE  ++  
Sbjct: 1187 SSLNYLKQFPIDVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLD 1246

Query: 627  FLTKNGVNERQGFLFAKPMPAAAFE 651
            FL ++G +E QG+LF +PMPA  FE
Sbjct: 1247 FLREHGCDEVQGYLFGRPMPANRFE 1271