Pairwise Alignments

Query, 663 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Enterobacter asburiae PDN3

Subject, 994 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  333 bits (853), Expect = 3e-95
 Identities = 201/582 (34%), Positives = 303/582 (52%), Gaps = 19/582 (3%)

Query: 91  GTASAWNDTPSVARDLAQGLSFAEQVVSEANSVIVIL-------DRHGNIQRFNRLSEEY 143
           G A  + D     R   Q L   E  VS  N ++ I        D+   I   N   E++
Sbjct: 405 GLAVYFRDVTERRRSQEQ-LMLLETSVSRLNDIVAIAETGAGSDDQEPRIVFVNDAFEQH 463

Query: 144 TGLKEQEVIGQNVFKLFMSRSEAAASKRNITGFFRNGSSYEVERWIKTRKGQRLFLFRNK 203
           TG    EV+GQ   ++ +    A    R +    +       E  ++ + G   ++    
Sbjct: 464 TGYSRAEVLGQTP-RMLLELDPAIPKLRELAQGLQQTRQARTELMVRRKNGAMFWVELEV 522

Query: 204 FVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTDTITGLPNRNAIHDLISDAI--DN 261
                + +     +  G DIT+ + A++ +R LA  D +T LPNR  + D +  A+    
Sbjct: 523 VSVQATAEEVTHWVAVGRDITQRKTAEDMIRHLAFYDALTDLPNRQLLLDRLQQALAASA 582

Query: 262 RGDTQVGVVYLDLDNFKKVNDAYGHMFGDQLLQAVALAILSCLDEEQVLARLGGDEFIVM 321
           R      ++++DLDNFK +ND  GH  GDQLLQ VA  +   + +  ++ARLGGDEF+VM
Sbjct: 583 RSGQHGALMFIDLDNFKILNDTLGHHMGDQLLQKVAARLTRSVRKTDMVARLGGDEFVVM 642

Query: 322 ATNTSQG------SLEAMASRILTRLRQPFRIGLIEIYTGCSLGIALAPQHGNDRESVIR 375
             + S           A+A ++L  LR+PF++   + +   S+G+       +D   +++
Sbjct: 643 VDDLSTDPDAAAFKATALAEKVLNTLREPFQLTGHQHFATPSIGVTSFNGQQSDVGELLK 702

Query: 376 NADTAMYTAKENGRGKFCVFSPEMNQRVFEYLWLDTNLRKALDNDQLLIHYQPKITWRGE 435
            AD AMY AK  GR   C F P M   V     + ++LR AL   Q ++HYQP++   G 
Sbjct: 703 QADLAMYQAKSLGRNTLCFFDPNMAATVSANATVSSDLRVALSEQQFVVHYQPQVDRVGV 762

Query: 436 VRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVMLDVVRQVAKWRDK--GINL 493
           +  +EALVRWQ P+RGLI P +FI  AE++GLI+PLG+WV+     Q+A W D+    NL
Sbjct: 763 ITGVEALVRWQHPQRGLIFPADFIPVAEDTGLILPLGQWVLEKSCEQLAAWADRPQTANL 822

Query: 494 RVAVNVSARQLADQTIFSDLKQALKDLNFEYCPVDVELTESCLIENEELALSVIQQFSRL 553
            +AVNVS RQ         +  A+         + +ELTES L +  E+ +  +     L
Sbjct: 823 SIAVNVSVRQFRHPDFVDMVMAAITRTGIRPHKLKLELTESLLADRMEITIDKMGMLKAL 882

Query: 554 GAQIHLDDFGTGYSSLSQLARFPIDAIKLDQSFVRDIHKQSISQSLVRAIVAVAQALNLQ 613
           G  + LDDFG GYSSLS L R P+D +K+D+ FV D+       ++ RAI+A+AQ+L+LQ
Sbjct: 883 GVTLSLDDFGVGYSSLSVLKRLPLDQLKIDKGFVADVLTDPNDAAISRAIIALAQSLSLQ 942

Query: 614 VIAEGVENAKEDAFLTKNGVNERQGFLFAKPMPAAAFERWLK 655
           V+AEGVE  ++  FL   G ++ QG LFAKP+P  A +  L+
Sbjct: 943 VVAEGVETQEQRDFLAYQGCDQFQGHLFAKPLPIEALDALLQ 984