Pairwise Alignments

Query, 663 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Enterobacter asburiae PDN3

Subject, 661 a.a., cyclic-di-GMP phosphodiesterase; csgD regulator; modulator of RNase II stability from Escherichia coli BL21

 Score = 1049 bits (2712), Expect = 0.0
 Identities = 519/655 (79%), Positives = 591/655 (90%)

Query: 6   EQNLLFRYMGTHSPWWRLSADSNALHLSTSENADVTQVVALDDEQADLIRHLTVITSSIS 65
           E   L+ ++G+H+ +WRL+  S+ L  ST+E  +  +++ L  EQA  IR +TVITSS+ 
Sbjct: 6   ESTTLYNFLGSHNSYWRLTESSDVLRFSTTETTEPERMLQLSAEQAARIREMTVITSSLM 65

Query: 66  MSLSLYGEDVPVHLVGRKITRNEWAGTASAWNDTPSVARDLAQGLSFAEQVVSEANSVIV 125
           MSL++   D+ VHLVGRKI + EWAG ASAW+DTP+VARDL+ GLSFAEQVVSEA+S IV
Sbjct: 66  MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125

Query: 126 ILDRHGNIQRFNRLSEEYTGLKEQEVIGQNVFKLFMSRSEAAASKRNITGFFRNGSSYEV 185
           ILD  GNIQRFNRL E+YTGLKE +VIGQ+VFKLFMSR EAAAS+RN   FFR+G++YEV
Sbjct: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185

Query: 186 ERWIKTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTDTITGL 245
           E WI TRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR+LANTD+ITGL
Sbjct: 186 ELWIPTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245

Query: 246 PNRNAIHDLISDAIDNRGDTQVGVVYLDLDNFKKVNDAYGHMFGDQLLQAVALAILSCLD 305
           PNRNA+ +LI  AI++  + +VGVVYLDLDNFKKVNDAYGH+FGDQLL+ V+LAILSCL+
Sbjct: 246 PNRNAMQELIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLE 305

Query: 306 EEQVLARLGGDEFIVMATNTSQGSLEAMASRILTRLRQPFRIGLIEIYTGCSLGIALAPQ 365
            +QVLAR GGDEF+V+A+NTSQ +LEAMASRILTRLR PFRIGLIE+YT CS+GIAL+P+
Sbjct: 306 HDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPE 365

Query: 366 HGNDRESVIRNADTAMYTAKENGRGKFCVFSPEMNQRVFEYLWLDTNLRKALDNDQLLIH 425
           HG+D  ++IR+ADTAMYTAKE GRG+FCVF+PEMNQRVFEYLWLDTN RKAL+NDQL+IH
Sbjct: 366 HGSDSAAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNFRKALENDQLVIH 425

Query: 426 YQPKITWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVMLDVVRQVAK 485
           YQPKITWRGEVRSLEALVRWQSPERGLIPPL+FISYAEESGLIVPLGRWV+LDVVRQVAK
Sbjct: 426 YQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAK 485

Query: 486 WRDKGINLRVAVNVSARQLADQTIFSDLKQALKDLNFEYCPVDVELTESCLIENEELALS 545
           WRDKGINLRVAVN+SARQLADQTIF+ LKQ L++LNFEYCP+DVELTESCLIEN+ELALS
Sbjct: 486 WRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALS 545

Query: 546 VIQQFSRLGAQIHLDDFGTGYSSLSQLARFPIDAIKLDQSFVRDIHKQSISQSLVRAIVA 605
           VIQQFS+LGAQ+HLDDFGTGYSSLSQLARFPIDAIKLDQ FVRDIHKQ +SQSLVRAIVA
Sbjct: 546 VIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVA 605

Query: 606 VAQALNLQVIAEGVENAKEDAFLTKNGVNERQGFLFAKPMPAAAFERWLKRYQAR 660
           VAQALNLQVIAEGVE+AKEDAFLTKNG+NERQGFLFAKPMPA AFERW KRY  R
Sbjct: 606 VAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660