Pairwise Alignments

Query, 220 a.a., DNA polymerase III, epsilon subunit and related 3'-5' exonucleases from Enterobacter asburiae PDN3

Subject, 205 a.a., DNA polymerase III alpha subunit (EC 2.7.7.7) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 50.8 bits (120), Expect = 2e-11
 Identities = 48/161 (29%), Positives = 68/161 (42%), Gaps = 18/161 (11%)

Query: 2   LRVIDTETCDLQGG----IVEVASVDVVDGKIVNPMSHLVRPDRPISPQAMAIHRITESM 57
           + VID ET  +  G      EVA V    G++V+    L+     I      +  IT +M
Sbjct: 4   IAVIDFETTGISPGQGDRATEVAIVITEQGRVVDRYQSLMNAGVRIPSFITQLTGITNAM 63

Query: 58  VADKPWIEEII---PHYYGSPWYVAHNASFDRRVL--------PEMPGEWICTMKLARRL 106
           +   P  + ++     + G    VAHNA+FDRR           E P  + CT+ L+RRL
Sbjct: 64  IETAPPADTVMREAARFVGEVPMVAHNAAFDRRFWMAELERAGAEAPQPFACTVLLSRRL 123

Query: 107 WPGIKYSNMALYKSRKLSVRTPEGLHHHRALYDCYITAALL 147
           +P      +    S     R P     HRAL D  + A LL
Sbjct: 124 YPEAPSHKLG---SLVDFFRLPRTGQAHRALADAEMAAELL 161