Pairwise Alignments

Query, 220 a.a., DNA polymerase III, epsilon subunit and related 3'-5' exonucleases from Enterobacter asburiae PDN3

Subject, 246 a.a., DNA polymerase III epsilon subunit (EC 2.7.7.7) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 54.3 bits (129), Expect = 2e-12
 Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 36/174 (20%)

Query: 4   VIDTETCDLQG--------GIVEVASVDVVDGKIVNPMSHL-VRPDRPISPQAMAIHRIT 54
           V+DTET  +           I+E+ +V+V++ ++     H+ ++PDR + P+A  +H I 
Sbjct: 13  VLDTETTGMNQIGAHYEGHKIIEIGAVEVINRRLTGNNFHVYLKPDRLVDPEAFGVHGIA 72

Query: 55  ESMVADKPWIEEIIPH---YYGSPWYVAHNASFD-----------RRVLPEMPGEWIC-- 98
           +  + DKP   +++     Y      V HNASFD           +R +P+      C  
Sbjct: 73  DEFLLDKPVFADVVDEFLDYIRGAELVIHNASFDIGFMDYEFGLLKRDIPKT--NTFCKV 130

Query: 99  --TMKLARRLWPGIKYSNMALYKSRKL--SVRTPEGLHHHRALYDCYITAALLI 148
             ++ LAR+++PG + S  AL    ++  S RT      H AL D  I A + +
Sbjct: 131 TDSLALARKMFPGKRNSLDALCSRYEIDNSKRT-----LHGALLDAQILAEVYL 179