Pairwise Alignments

Query, 220 a.a., DNA polymerase III, epsilon subunit and related 3'-5' exonucleases from Enterobacter asburiae PDN3

Subject, 457 a.a., DNA repair nuclease with dnaQ and GIY-YIG domains (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 56.6 bits (135), Expect = 8e-13
 Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 20/163 (12%)

Query: 4   VIDTETCDLQGG---IVEVASVDVVDGKIVNPMSHLVRPDRPISPQAMAIHRITESMVAD 60
           ++D ET    G    I EVA+V     +I++    L+ PD  I      +  I +SMV  
Sbjct: 5   IVDIETTGGYGKRHRITEVAAVAHNGSQILDSFQTLINPDCEIPGFITGLTGIDQSMVEG 64

Query: 61  KPWIEEIIPHYYG---SPWYVAHNASFD--------RRVLPEMPGEWICTMKLARRLWPG 109
            P+ E+I    Y       +VAHN +FD         R+        +CT++L+R+++PG
Sbjct: 65  APYFEDIADELYAFLEDKIFVAHNVNFDYQFIRSEFERIGKSFDRPKLCTVRLSRKIFPG 124

Query: 110 IK-YSNMALYKSRKLSVRTPEGLHHHRALYDCYITAALLIDIM 151
           ++ YS   + + + + +++      HRA  D   TA L   ++
Sbjct: 125 LRSYSLGRICEHKNIEIKS-----RHRAFGDAEATAELFTKLL 162