Pairwise Alignments

Query, 220 a.a., DNA polymerase III, epsilon subunit and related 3'-5' exonucleases from Enterobacter asburiae PDN3

Subject, 237 a.a., DNA polymerase III, epsilon chain from Caulobacter crescentus NA1000 Δfur

 Score = 58.5 bits (140), Expect = 1e-13
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 21/165 (12%)

Query: 4   VIDTETC--DLQGG--IVEVASVDVVDGKIVNPMSH-LVRPDRPISPQAMAIHRITESMV 58
           ++DTET   D + G  +VE+  ++VVD        H    P R +  +A  +H ++ + +
Sbjct: 6   ILDTETTGFDPKTGDRLVEIGCIEVVDFMPTGRSFHEYCDPLRDMPAEAEKVHGLSSAFL 65

Query: 59  ADKPWIEEIIPHYY---GSPWYVAHNASFDRRVL----------PEMPGEWICTMKLARR 105
             KP   EI   +    G    VAHNA+FDR+ +          P     W+ T+ +A++
Sbjct: 66  TGKPKFHEIADRFLDFVGDSVVVAHNAAFDRQFVNFELEKCGKAPIHEERWVDTLAMAKK 125

Query: 106 LWPGIKYSNMALYKSRKLSVRTPEGLHHHRALYDCYITAALLIDI 150
            +PG+  S  AL K  K+S+   E    H AL D ++ A + +++
Sbjct: 126 RFPGMYNSLDALCKRFKISL---ESRDKHGALIDAHLLAEVYLEL 167