Pairwise Alignments

Query, 220 a.a., DNA polymerase III, epsilon subunit and related 3'-5' exonucleases from Enterobacter asburiae PDN3

Subject, 243 a.a., DNA polymerase III epsilon subunit from Escherichia coli BL21

 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 36/174 (20%)

Query: 4   VIDTETCDLQG--------GIVEVASVDVVDGKIVNPMSHL-VRPDRPISPQAMAIHRIT 54
           V+DTET  +           I+E+ +V+VV+ ++     H+ ++PDR + P+A  +H I 
Sbjct: 10  VLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDPEAFGVHGIA 69

Query: 55  ESMVADKPWIEEIIPH---YYGSPWYVAHNASFD-----------RRVLPEMPGEWIC-- 98
           +  + DKP   E+      Y      V HNA+FD           +R +P+      C  
Sbjct: 70  DEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPKT--NTFCKV 127

Query: 99  --TMKLARRLWPGIKYSNMALYKSRKL--SVRTPEGLHHHRALYDCYITAALLI 148
             ++ +AR+++PG + S  AL    ++  S RT      H AL D  I A + +
Sbjct: 128 TDSLAVARKMFPGKRNSLDALCARYEIDNSKRT-----LHGALLDAQILAEVYL 176