Pairwise Alignments

Query, 818 a.a., P pilus assembly protein, porin PapC from Enterobacter asburiae PDN3

Subject, 870 a.a., Outer membrane usher protein SfmD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  529 bits (1363), Expect = e-154
 Identities = 303/833 (36%), Positives = 469/833 (56%), Gaps = 57/833 (6%)

Query: 1   MASFSTLGREYRFSPSSLEGDMLAQQDIDLSLFSKSNAQLPGTYSSRVQVNEHRLSTTNI 60
           +   ++ G  Y F+P+ L  D  +  D  LS F K N Q PG Y   +  N+  ++T +I
Sbjct: 29  LCPLTSRGESY-FNPAFLSADTASVAD--LSRFEKGNHQPPGIYRVDIWRNDEFVATQDI 85

Query: 61  ------VYVSSPEGSLIPQLTPDMLRAWGIAIDQYP--DLLALPTNKALPKDISNYIPQA 112
                 V      G L+P  TP+ ++  G+    +P  D     T   LP+ I    P A
Sbjct: 86  RFEAGAVGTGDKSGGLMPCFTPEWIKRLGVNTAAFPVSDKGVDTTCIHLPEKI----PGA 141

Query: 113 SARLDFSTMTLALSIPQAALSGTGHDYIDPSRWDDGVPVLFSDYAFSGSKNKDNGDNSAT 172
               DF++M L +S+PQA+L  +   YI P  WD+G+P    +Y+F+GS+  D+      
Sbjct: 142 EVAFDFASMRLNISLPQASLLNSARGYIPPEEWDEGIPAALINYSFTGSRGTDSD----- 196

Query: 173 SQYLNLRTGANLGGWRVRNYSTWSNSESEN----QWENINTFLQHDVDALKAQFTAGESN 228
           S +L+L +G N G WR+RN   W+ S+ +     +W NI T++Q  +  LK++   G+SN
Sbjct: 197 SYFLSLLSGLNYGPWRLRNNGAWNYSKGDGYHSQRWNNIGTWVQRAIIPLKSELVMGDSN 256

Query: 229 TRGEVFDSLQYRGVNLASDEEMLPYSQRGYAPVIRGIASSNAEVSVRQNGYLIYQQNVAP 288
           T  +VFDS+ +RG  L S + M P S +GYAP +RGIA + A++++RQNGY+IYQ  V+P
Sbjct: 257 TGNDVFDSVGFRGARLYSSDNMYPDSLQGYAPTVRGIARTAAKLTIRQNGYVIYQSYVSP 316

Query: 289 GAFEINDLYSTTNSGDLDVTVKEADGTEHRFTQPYSSIAIMLRPGRMKYEMTAGRYRAES 348
           GAF I DL  T++SGDL+VTV E DG++ R+T PYS++ ++ R GR+KY++ AG +R+  
Sbjct: 317 GAFAITDLNPTSSSGDLEVTVDEKDGSQQRYTVPYSTVPLLQREGRVKYDLVAGDFRS-G 375

Query: 349 GSDQKEPNFFQGSMIYGLNNLLTWFGGLTLSKDYNAANTGAGLALGPLGSLSADVTMADT 408
            S Q  P FFQG++I GL   LT +GG  L+  Y A   GAG  LG  G++S DVT A +
Sbjct: 376 NSQQSSPFFFQGTVIAGLPAGLTAYGGTQLADRYRAVVVGAGRNLGDWGAVSVDVTHARS 435

Query: 409 RLDDNSQHTGQSWRLLYTGKLDSTNTNFSLGSYRYSSRGYYSFAD-ANQKRDGHEDDL-- 465
           +L D+S H GQS R LY   L++  TNF L  YRYS+RG+Y+  D A +  +G++ +   
Sbjct: 436 QLADDSTHQGQSLRFLYAKSLNNYGTNFQLLGYRYSTRGFYTLDDVAYRSMEGYDYEYDS 495

Query: 466 --------------LFRYNKRNRIQASVSQTVAGV-SLYLNGYQQDYWGTSKKERSLSVG 510
                           RY+K+ R Q ++SQ +    SLYL+G QQ+YW T+       +G
Sbjct: 496 DGRRHKVPVAQSYHNLRYSKKGRFQVNISQNLGDYGSLYLSGSQQNYWNTADTNTWYQLG 555

Query: 511 LNTVIAGTSYHIAYTYSKT-NDEEADRMVSLGFSIPLA----------RWLPRAWSSYNI 559
             +   G SY +++++S++     ADR+++   S+P +            L R ++++N 
Sbjct: 556 YASGWQGISYSLSWSWSESVGSSGADRILAFNMSVPFSVLTGRRYARDTILDRTYATFNA 615

Query: 560 SNTKNGYTRQNVGLSGTLLDDERLSYSLQQSHSNHDGEDISSVYGSYRSQYANLTAGYYA 619
           +  ++G      G+ GTLL+   LSYS+ Q  S+ +G    S   S+++ Y  L  GY  
Sbjct: 616 NRNRDGDNSWQTGVGGTLLEGRNLSYSVTQGRSSSNGYS-GSASASWQATYGTLGVGYNY 674

Query: 620 STDNSQQLNYGISGGIVAHPQGVTLAQPLGSQFAIVNANDASGVRFLNQRGIQTDWQGNA 679
             D     N+ +SGG+V H  G+T +QPLG    ++ A  A GVR  NQ G++TDW+G A
Sbjct: 675 DRD-QHDYNWQLSGGVVGHADGITFSQPLGDTNVLIKAPGAKGVRIENQTGVKTDWRGYA 733

Query: 680 VIPSLTPYQENNIRIDTSSLPENVDSSDTAITVIPSRNAAVLARFDAHTGYRMLITLKRP 739
           V+P  T Y+ N + +DT+++  + D  +   +V+P+  A V A FD   G R +IT  R 
Sbjct: 734 VMPYATVYRYNRVALDTNTMDNHTDVENNVSSVVPTEGALVRAAFDTRIGVRAIIT-ARL 792

Query: 740 NGLPVPFGAIATSSDPVMSGIVDETGTVYLAGIGETAQVTVKWGNGTGQQCRA 792
            G P+PFGAI   +   ++ +V + G +YL+G+    ++ ++WG G   +C A
Sbjct: 793 GGRPLPFGAIVRETASGITSMVGDDGQIYLSGLPLKGELFIQWGEGKNARCIA 845