Pairwise Alignments

Query, 818 a.a., P pilus assembly protein, porin PapC from Enterobacter asburiae PDN3

Subject, 873 a.a., type 1 fimbriae anchoring protein FimD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  593 bits (1528), Expect = e-173
 Identities = 335/827 (40%), Positives = 490/827 (59%), Gaps = 50/827 (6%)

Query: 10  EYRFSPSSLEGDMLAQQDIDLSLFSKSNAQLPGTYSSRVQVNEHRLSTTNIVYVS----- 64
           E  F+P+ L  D  A  D  LS FS+ NAQ  G Y   V +N   L+T +I + +     
Sbjct: 36  ENYFNPAFLSDDPSAVAD--LSTFSR-NAQAAGMYRVDVYLNNTFLATRDIAFQAVKTTG 92

Query: 65  ----SPEGSLIPQLTPDMLRAWGIAIDQYPDLLALPTNKALPKDISNYIPQASARLDFST 120
               + +  L   LTP+ML+  G+    +P LLA     + P D+++ IP A  R DF+ 
Sbjct: 93  KSAPTDDSGLRACLTPEMLKNMGVNTGAFP-LLAKAAAGSCP-DLASAIPAARTRFDFAQ 150

Query: 121 MTLALSIPQAALSGTGHDYIDPSRWDDGVPVLFSDYAFSGSKNKDN--GDNSATSQYLNL 178
             L +SIPQAA+  +   YI P  WD+G+  L  +Y F+G+ ++D   G ++  S +L L
Sbjct: 151 QRLDISIPQAAMVASARGYIPPKYWDEGINALLLNYTFTGANSQDRSPGGSAENSYFLGL 210

Query: 179 RTGANLGGWRVRNYSTWS----NSESENQWENINTFLQHDVDALKAQFTAGESNTRGEVF 234
            +G NLG WR+R+YSTW+    +  S++ W++I+T+L+ DV  L+ + TAG+S T   +F
Sbjct: 211 NSGLNLGAWRLRDYSTWNANSGDQNSDSDWQHISTYLERDVVFLQGELTAGDSYTPSALF 270

Query: 235 DSLQYRGVNLASDEEMLPYSQRGYAPVIRGIASSNAEVSVRQNGYLIYQQNVAPGAFEIN 294
           DSL +RG+ LASD+ MLP S +G+AP I GIA SNA+V++RQNGY+I Q+ V PGAF IN
Sbjct: 271 DSLPFRGLQLASDDNMLPDSMKGFAPTIHGIARSNAQVTIRQNGYIINQRYVPPGAFTIN 330

Query: 295 DLYSTTNSGDLDVTVKEADGTEHRFTQPYSSIAIMLRPGRMKYEMTAGRYRAESGSDQKE 354
           DLY T  SGDL V VKE+DG+ +R+  PYS++ I+ R GR+KY  T   YR++S S +++
Sbjct: 331 DLYPTAASGDLTVEVKESDGSINRYNVPYSAVPILQREGRLKYAATVAEYRSDS-SQKEK 389

Query: 355 PNFFQGSMIYGLNNLLTWFGGLTLSKDYNAANTGAGLALGPLGSLSADVTMADTRLDDNS 414
             F Q ++I+GL +  T +GG  LS  Y+A   G+G  LG  G++S DVT A + L DN+
Sbjct: 390 VKFSQATLIWGLPHGFTLYGGTQLSSHYHALAIGSGANLGDWGAVSLDVTQATSTLADNN 449

Query: 415 QHTGQSWRLLYTGKLDSTNTNFSLGSYRYSSRGYYSFADANQKR-DGHEDD--------- 464
            + GQS R LY   L  + TN  L  YRYS+ G+Y+  D   KR  G++DD         
Sbjct: 450 TYQGQSLRFLYAKSLAQSGTNLQLMGYRYSTSGFYTLDDTTWKRMSGYDDDSRTDSDKSR 509

Query: 465 ------LLFRYNKRNRIQASVSQTVAGV-SLYLNGYQQDYWGTSKKERSLSVGLNTVIAG 517
                     Y +R ++Q  ++Q + G+ SL++ G QQ YW T +K+  L VG +  +AG
Sbjct: 510 PEWADYYNLYYTRRGKVQLDINQQLGGLGSLFITGSQQSYWHTDEKDSLLQVGYSDTLAG 569

Query: 518 TSYHIAYTYSKT-NDEEADRMVSLGFSIPLARWLP---------RAWSSYNISNTKNGYT 567
            ++ ++Y  +K+  D E D++ +L  S+PL++WL            +++++ S  K    
Sbjct: 570 IAWSVSYNNNKSAGDAERDQIFALNISVPLSQWLQHGDEVTRHHNVYATFSTSTDKQHNV 629

Query: 568 RQNVGLSGTLLDDERLSYSLQQSHSNHDGEDISSVYGSYRSQYANLTAGYYASTDNS-QQ 626
            QN GLSGTLLD+  LSY++QQ + NH   +  +    Y     N   GY  S +   QQ
Sbjct: 630 TQNAGLSGTLLDENNLSYNIQQGYQNHGIGESGAASLEYDGAKGNANIGYNVSDNGDYQQ 689

Query: 627 LNYGISGGIVAHPQGVTLAQPLGSQFAIVNANDASGVRFLNQRGIQTDWQGNAVIPSLTP 686
           +NYG+SGG+VAH  GVTL+QPLG+   ++ A  A+ V  ++Q GI TD +G AV+P  T 
Sbjct: 690 VNYGLSGGLVAHAHGVTLSQPLGNTNILIAAPGAANVGVVDQPGIHTDARGYAVVPYATT 749

Query: 687 YQENNIRIDTSSLPENVDSSDTAITVIPSRNAAVLARFDAHTGYRMLITLKRPNGLPVPF 746
           Y++N + +D +++ ++VD  D    V+P+  A VLARF A  G R L+TL   NG PVPF
Sbjct: 750 YRQNRMALDVNAMADDVDIDDAVTRVVPTEGALVLARFKARVGARALVTLNH-NGKPVPF 808

Query: 747 GAIATSSDPVMSGIVDETGTVYLAGIGETAQVTVKWGNGTGQQCRAS 793
           GA  T +D     IVDE G VYL+G+     + V+WGN   QQC AS
Sbjct: 809 GATVTVNDRHAEAIVDEAGEVYLSGLSAQGVLHVRWGNLPDQQCVAS 855