Pairwise Alignments

Query, 328 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Enterobacter asburiae PDN3

Subject, 323 a.a., L-arabinose transport system permease protein (TC 3.A.1.2.2) from Pseudomonas fluorescens GW456-L13

 Score =  385 bits (988), Expect = e-111
 Identities = 193/323 (59%), Positives = 243/323 (75%)

Query: 1   MSSVTTSGAPKSKSALSFGRIWDQYGMLVVFAALFLACAIFVPNFATFINMKGLGLAISM 60
           M +   +  P ++  L   R  D + ML+    +F+AC + + NF + +NM+GLGLAIS 
Sbjct: 1   MMTTQNNTLPTTRKPLDLRRFLDDWVMLLAAVGIFVACTLLIDNFLSPLNMRGLGLAIST 60

Query: 61  SGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINMTESLWIGVLAGLLLGVISGLVN 120
           +G+ AC ML+CLASG FDLSV SVIACAGV  AVV+  T S+++GV A L++G+I GL+N
Sbjct: 61  TGIAACTMLYCLASGHFDLSVGSVIACAGVVAAVVMRDTNSVFLGVCAALVMGLIVGLIN 120

Query: 121 GFVIARLKINALITTLATMQIVRGLAYIISDGKAVGIEDERFFTLGYANWLGLPAPIWLT 180
           G VIA+L++NALITTLATMQIVRGLAYI ++GKAVG+  E FF  G     G+P PI +T
Sbjct: 121 GIVIAKLRVNALITTLATMQIVRGLAYIFANGKAVGVSQESFFVFGNGQMFGVPVPILIT 180

Query: 181 VACLILFGFLLNRTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAAAGIILA 240
           + C + FG+LLN TT+GRNT+AIGGN+EAA LAGV V RTKIIIF + G++ A AG+ILA
Sbjct: 181 IVCFLFFGWLLNYTTYGRNTMAIGGNQEAALLAGVNVDRTKIIIFAVHGVIGALAGVILA 240

Query: 241 SRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISP 300
           SRMTSGQPM   G+EL VISACVLGGVSL GGIG I +V+AG+LIL  +ENAMNL NI  
Sbjct: 241 SRMTSGQPMIGQGFELTVISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDT 300

Query: 301 FSQYVVRGLILLAAVIFDRYKQK 323
           F QYV+RG ILL AV+ DR KQ+
Sbjct: 301 FYQYVIRGSILLLAVVIDRLKQR 323