Pairwise Alignments

Query, 328 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Enterobacter asburiae PDN3

Subject, 329 a.a., L-arabinose ABC transporter membrane protein from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  385 bits (990), Expect = e-112
 Identities = 196/319 (61%), Positives = 243/319 (76%)

Query: 5   TTSGAPKSKSALSFGRIWDQYGMLVVFAALFLACAIFVPNFATFINMKGLGLAISMSGMV 64
           T S     +  ++  R  D + ML+    +FL CA+F+ NF + +NM+GLGLAIS  G+ 
Sbjct: 11  TESSLQAPRQGMNLRRFADDWVMLLAAVGIFLLCAVFIDNFMSPLNMRGLGLAISTVGIA 70

Query: 65  ACGMLFCLASGDFDLSVASVIACAGVTTAVVINMTESLWIGVLAGLLLGVISGLVNGFVI 124
           AC MLFCLASG FDLSV SV+AC+GV  ++VI  T+S+++GV A L LG++ GL+NG VI
Sbjct: 71  ACTMLFCLASGHFDLSVGSVLACSGVIASIVIRDTDSVFLGVSAALALGLVVGLINGIVI 130

Query: 125 ARLKINALITTLATMQIVRGLAYIISDGKAVGIEDERFFTLGYANWLGLPAPIWLTVACL 184
           A+L+INALITTLATMQIVRGLAYI S+GKAVG+ +E FF  G     G+P PI +T+AC 
Sbjct: 131 AKLRINALITTLATMQIVRGLAYIFSNGKAVGVSNEDFFIFGNGQVYGVPVPILITIACF 190

Query: 185 ILFGFLLNRTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAAAGIILASRMT 244
           I FG+LLN TT+GRNT+AIGGN+EAA LAGV V RTKIIIF + GLV A AG++LASRMT
Sbjct: 191 IFFGWLLNYTTYGRNTMAIGGNQEAALLAGVHVDRTKIIIFAVHGLVGALAGVVLASRMT 250

Query: 245 SGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISPFSQY 304
           SGQPM   G+EL +ISACVLGGVSL GGIG I +V+AG+LIL  +ENAMNL NI  F QY
Sbjct: 251 SGQPMIGQGFELTIISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDTFYQY 310

Query: 305 VVRGLILLAAVIFDRYKQK 323
           V+RG ILL AVI DR K++
Sbjct: 311 VIRGTILLLAVIIDRMKRR 329