Pairwise Alignments

Query, 328 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Enterobacter asburiae PDN3

Subject, 322 a.a., ribose ABC transporter permease from Pectobacterium carotovorum WPP14

 Score =  199 bits (507), Expect = 6e-56
 Identities = 109/300 (36%), Positives = 166/300 (55%), Gaps = 4/300 (1%)

Query: 28  LVVFAALFLACAIFVPNFATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIAC 87
           L+    L    +   PNF T  N+  +    S++ ++A GM   + +   DLSV S++A 
Sbjct: 23  LIALLILIAVVSAMSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLAL 82

Query: 88  AGVTTAVVINMTESLWIGVLAGLLLGVISGLVNGFVIARLKINALITTLATMQIVRGLAY 147
            G   A ++ +  +  + V   L LG + G   G ++++ K+ A I TL  M ++RG+  
Sbjct: 83  TGAVAASIVGLEVNALVAVFGALALGALIGAGTGVIVSKGKVQAFIATLVMMLLLRGVTM 142

Query: 148 IISDGKAV--GIED--ERFFTLGYANWLGLPAPIWLTVACLILFGFLLNRTTFGRNTLAI 203
           + ++G  V  G  D  + F   G    LG+P PIW+         ++L+ T  GR   A+
Sbjct: 143 VYTNGSPVNTGFSDVADAFGWFGIGRPLGIPTPIWIMAIVFAAAWYMLHHTRLGRYIYAL 202

Query: 204 GGNEEAARLAGVPVVRTKIIIFVLSGLVSAAAGIILASRMTSGQPMTSIGYELIVISACV 263
           GGNE A RL+G+ V R KII++ L GL+SA AGII  +R++S QP    GYEL  I+A V
Sbjct: 203 GGNESATRLSGISVDRVKIIVYSLCGLLSALAGIIEVARLSSAQPTAGTGYELDAIAAVV 262

Query: 264 LGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISPFSQYVVRGLILLAAVIFDRYKQK 323
           LGG SL GG G+I   + G LILG + N +NLL +S + Q +V+ +++L AV+ D    K
Sbjct: 263 LGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVDNKSSK 322