Pairwise Alignments

Query, 328 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Enterobacter asburiae PDN3

Subject, 321 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  202 bits (513), Expect = 1e-56
 Identities = 110/299 (36%), Positives = 168/299 (56%), Gaps = 4/299 (1%)

Query: 28  LVVFAALFLACAIFVPNFATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIAC 87
           L+    L    +   PNF T  N+  +    S++ ++A GM   + +   DLSV S++A 
Sbjct: 23  LIALLVLIAIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLAL 82

Query: 88  AGVTTAVVINMTESLWIGVLAGLLLGVISGLVNGFVIARLKINALITTLATMQIVRGLAY 147
            G   A ++ +  +  + V A L LG   G V G ++A+ ++ A I TL  M ++RG+  
Sbjct: 83  TGAVAASIVGVEVNALVAVAAALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVTM 142

Query: 148 IISDGKAV--GIED--ERFFTLGYANWLGLPAPIWLTVACLILFGFLLNRTTFGRNTLAI 203
           + +DG  V  G  D  + F   G    LG+P P+W+     I   ++L+ T  GR   A+
Sbjct: 143 VYTDGSPVNTGFTDNADLFGWFGIGRPLGVPTPVWIMAIVFIAAWYMLHHTRLGRYIYAL 202

Query: 204 GGNEEAARLAGVPVVRTKIIIFVLSGLVSAAAGIILASRMTSGQPMTSIGYELIVISACV 263
           GGNE A RL+G+ V + KII++ L GL ++ AGII  +R++S QP    GYEL  I+A V
Sbjct: 203 GGNEAATRLSGISVSKVKIIVYSLCGLTASLAGIIEVARLSSAQPTAGTGYELDAIAAVV 262

Query: 264 LGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISPFSQYVVRGLILLAAVIFDRYKQ 322
           LGG SL GG G+I   + G LILG + N +NLL +S + Q +V+ +++L AV+ D  KQ
Sbjct: 263 LGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVDNKKQ 321