Pairwise Alignments

Query, 610 a.a., Excinuclease ABC subunit C from Enterobacter asburiae PDN3

Subject, 607 a.a., excinuclease ABC subunit UvrC from Pseudomonas fluorescens SBW25

 Score =  609 bits (1570), Expect = e-178
 Identities = 316/610 (51%), Positives = 430/610 (70%), Gaps = 8/610 (1%)

Query: 1   MSDVFDSKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALV 60
           M+  FD  AFL T + +PGVYRM+D+   ++YVGKAK+LK RL+SYFR +  + KT ALV
Sbjct: 1   MTTPFDPSAFLSTCSGRPGVYRMFDSEARLLYVGKAKNLKNRLASYFRKSGLAPKTAALV 60

Query: 61  SLIQNIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRG 120
           + I  ++ T+T  ETEALLLE   IK ++P YN+LLRDDKSYP++FLS    PRL++HRG
Sbjct: 61  ARIAQVETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGNFPRLSIHRG 120

Query: 121 AKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVE 180
           AK  KG+YFGP+P+  A+RE+L+LLQK F +RQCE+S Y+NR+RPCLQYQI RC  PCV 
Sbjct: 121 AKKQKGKYFGPYPSAGAIRESLSLLQKTFFVRQCEDSFYKNRTRPCLQYQIKRCKAPCV- 179

Query: 181 GLVSEEEYAQQVDYVRLFLAGKDDQVLTQLIARMEKASAALEFEEAARIRDQIQAVRRVT 240
           GLV   EYA+ V +  +FL G+ + +  +L   ME+A++ L+FE AA +RDQI  +RRV 
Sbjct: 180 GLVDPAEYAEDVRHSVMFLEGRSNALTDELSGAMEQAASTLDFERAAELRDQISLLRRVQ 239

Query: 241 EKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELGEVVETFV 300
           ++Q +     D+DVI    + G ACVH++ +R G+VLGS+++FP+     E+ EV+  F+
Sbjct: 240 DQQSMEGGTGDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQTGIDEEVAEVMAAFL 299

Query: 301 GQFYLQGSQMRTLPSEILLDFNLDDKTLLADSLSELAGRRVNVQTKPRGDRARYLKLART 360
           GQ+Y+  S  R LPSE++++   +D   L +++ EL GR +++  + RG RAR+ +LA T
Sbjct: 300 GQYYV-SSPERDLPSELIVNVVHEDFPTLIEAIHELRGRELDISHRVRGTRARWQQLAVT 358

Query: 361 NAATALTTKLSQQSTVHQRLAALATLLKLPE-VKRMECFDISHTMGEQTVASCVVFDANG 419
           NA  AL  +L+ +  V  R  ALA +L L E  +R+EC+DISH+ GE TVASCVVF   G
Sbjct: 359 NAEQALGARLANRQHVAARFDALAEVLNLDEPPQRLECYDISHSSGEATVASCVVFGPEG 418

Query: 420 PLRAEYRRYNITGITPGDDYAAMNQVLRRRYGKAIE-ESKIPDVILIDGGKGQLGQAKAV 478
           P++++YRRYNI G+T GDDYAAM+Q L RR+ K  + E K+PD++L+DGGKGQL  A+ V
Sbjct: 419 PIKSDYRRYNIEGVTAGDDYAAMHQALTRRFSKLKDGEGKLPDILLVDGGKGQLSMARDV 478

Query: 479 FESLDVSWDKNHPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESH 538
              L V       +LLGVAKGA RKAG ETL+       F+L  DSPALH+IQ IRDE+H
Sbjct: 479 LNELAVP----DLILLGVAKGATRKAGFETLYLNDSAHEFTLKGDSPALHLIQQIRDEAH 534

Query: 539 DHAISGHRKKRAKVKNTSSLETIEGVGPKRRQMLLKYMGGLQGLLNASMEEIAKVPGISQ 598
             AI+GHR +R K + TS+LE + GVGP RR+ LLK+ GGLQ L  AS++EIAK PGIS+
Sbjct: 535 RFAITGHRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIDEIAKAPGISK 594

Query: 599 GLAEKIYYSL 608
            LAE IY +L
Sbjct: 595 KLAELIYANL 604