Pairwise Alignments

Query, 274 a.a., Bacterial flagellin N-terminal helical region/Bacterial flagellin C-terminal helical region from Enterobacter asburiae PDN3

Subject, 687 a.a., flagellin, filament structural protein from Pseudomonas putida KT2440

 Score =  173 bits (438), Expect = 1e-47
 Identities = 94/201 (46%), Positives = 128/201 (63%), Gaps = 3/201 (1%)

Query: 4   INTNLMSLTTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRMTSQIKGMTQA 63
           +NTN+ S++ Q NLNKS  +LGT + RLSSGL+INSAKDDAAG  I+NR+T+QIKG++ A
Sbjct: 5   VNTNITSMSVQKNLNKSSDALGTTMGRLSSGLKINSAKDDAAGLQISNRLTTQIKGLSVA 64

Query: 64  ARNANDGISMAQTAEGSLNEINNNLQRVRELAVQASNGTNSTSDLASLQDEVTARLAEIN 123
            +NANDGIS+AQTAEG++    N +QR+RELA+Q++NG+NS  D AS+Q E TA   E+ 
Sbjct: 65  VKNANDGISIAQTAEGAMATSGNIMQRMRELALQSANGSNSDDDRASMQQEFTALSGELT 124

Query: 124 RVAGKTDFNGIKLLDGTAGTAGKVKIQVGVNDGDTIDLDLSGAKADTTTLGVNAIDLKAM 183
           R+A  T F G  LLDGT   +     QVG N  ++I   +    A +     N   +   
Sbjct: 125 RIANTTTFGGRNLLDGTFSGS---SFQVGANSNESISFGMKDVSATSMKGNYNEASVAGG 181

Query: 184 TATDLDTIDKAIAKVDTARSG 204
            AT   ++  A  K  T  +G
Sbjct: 182 VATLQASVTGAAGKFGTNNAG 202



 Score =  105 bits (261), Expect = 4e-27
 Identities = 81/245 (33%), Positives = 125/245 (51%), Gaps = 20/245 (8%)

Query: 39  SAKDDAAGQAIANRMTSQIK-----GMTQAARNANDGISMAQTAEGSLNEINNNLQRVRE 93
           +AK+D     + +     IK     G+T     A  G++   T  G + + + +L  V  
Sbjct: 452 TAKNDNGRLVLTSANGQDIKLDNGSGVTGQGALAAVGLNSGTTKAGLVADTSISLNGVE- 510

Query: 94  LAVQASNGTNSTSDLASLQDEVTARLAEINRVAGKTDFN-----GIKLLDGTAGTAGKVK 148
             V+   G +  S  AS+    T   A +   AG +  +      I + DG+ GT G   
Sbjct: 511 --VKFKKGDDMDSIAASINAASTGVNASVVVNAGSSTLSLFADQDITVADGSNGT-GLAA 567

Query: 149 IQVGVNDGDTIDLDLSGAKADTTTLGVNAIDLKAMTATDLDTIDKAIAKVDTARSGLGAV 208
           + +    G T     S  + ++T   +N  D ++     +  +D A+  +D+ RS LGAV
Sbjct: 568 LGLTAVAGKT-----SAVEMESTVSNLNITDAQSAQQA-IQVLDGAMQSLDSQRSQLGAV 621

Query: 209 QNRFTSAINNLNNTSNNLSAAQSRIQDADYATEVSNMSRAQILQQAGTSVLSQANQVPQT 268
           QNRF S + NL + S N +AA+SRIQDAD+A E + +S+ Q LQQA T++LSQANQ+P +
Sbjct: 622 QNRFDSTVANLQSISENSTAARSRIQDADFAAETAELSKQQTLQQASTAILSQANQLPSS 681

Query: 269 VLSLL 273
           VL LL
Sbjct: 682 VLKLL 686