Pairwise Alignments

Query, 380 a.a., Outer membrane protein (porin) from Enterobacter asburiae PDN3

Subject, 374 a.a., porin OmpC from Escherichia coli ECRC62

 Score =  441 bits (1133), Expect = e-128
 Identities = 226/385 (58%), Positives = 291/385 (75%), Gaps = 16/385 (4%)

Query: 1   MKRKVLAIVVPALLMAGAANAAEMYNKNGNKVDLYGKVDARHTFSDNPGDDGDETYVQVG 60
           MK KVL+++VPALL+AGAANAAE+YNK+GNK+DLYGKVD  H FSDN  +DGD+TYV++G
Sbjct: 1   MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYFSDNKSEDGDQTYVRLG 60

Query: 61  FKGETRIANDLIGYGQWEYKTFANNTEGAGDKSFNRLAYAGLKYGEYGSFDYGRNYGVVY 120
           FKGET++ + L GYGQWEY+   N +E   + S+ R+A+AGLK+ + GSFDYGRNYGVVY
Sbjct: 61  FKGETQVTDQLTGYGQWEYQIQGNTSEDNKENSWTRVAFAGLKFQDVGSFDYGRNYGVVY 120

Query: 121 DVEAWTDMLPVFGGDSYTWTDNFMNGRANGLATYRNQDFFGLVEGLNFALQYQGANEGQD 180
           DV +WTD+LP FGGD+Y  +DNFM  R NG ATYRN DFFGLV+GLNFA+QYQG N    
Sbjct: 121 DVTSWTDVLPEFGGDTY-GSDNFMQQRGNGYATYRNTDFFGLVDGLNFAVQYQGKN---G 176

Query: 181 ATEDQEGTKNGHDDVRFQNGDGFGMSTSYDFAGDLSGLSLGAAYSSSDRTNEQVAYGKAA 240
           +   +  T NG   +R QNGDG G S +YD+     G  +GAA SSS RT++Q  +G   
Sbjct: 177 SVSGEGMTNNGRGALR-QNGDGVGGSITYDY----EGFGIGAAVSSSKRTDDQ-NFGLNG 230

Query: 241 EGIGYAG-GDKAEAWTVGAKYDANNVYLAMMYAETRNMTPIGNVGIANQTQNFEAVAQYQ 299
            G  Y G GD+AE +T G KYDANN+YLA  Y +T N T +G++G AN+ QNFEAVAQYQ
Sbjct: 231 YGERYLGNGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQ 290

Query: 300 FDFGLRPSLAWVYSKGKDLD---GKGF-NQDLVNYIDLGMTYSFNKNFSTYVDYKINMLD 355
           FDFGLRPS+A++ SKGK+L    G+ + ++D++ Y+D+G TY FNKN STYVDYKIN+LD
Sbjct: 291 FDFGLRPSVAYLQSKGKNLGVVAGRNYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLD 350

Query: 356 NDEALYDAYGISTDDIVGVGMTYQF 380
           +++   DA GI+TD+IV +G+ YQF
Sbjct: 351 DNQFTRDA-GINTDNIVALGLVYQF 374