Pairwise Alignments

Query, 388 a.a., D-alanyl-D-alanine carboxypeptidase from Enterobacter asburiae PDN3

Subject, 389 a.a., serine-type D-Ala-D-Ala carboxypeptidase DacD from Serratia liquefaciens MT49

 Score =  478 bits (1229), Expect = e-139
 Identities = 232/385 (60%), Positives = 299/385 (77%), Gaps = 1/385 (0%)

Query: 1   MKRRLFIAVSLLASSVSSAFAAEPLDFSPQ-PPAIQAGSWVLMDYTTGQILTAGNEHQQR 59
           MKR +++ ++ +   ++   A  P   +   PPAI A S+VLMDYTTGQ+L   N  Q+R
Sbjct: 1   MKRSVWVMIAGMLVPLAVQAADVPSSIAQNTPPAIDAASYVLMDYTTGQVLAQANADQRR 60

Query: 60  NPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKGNPVFDGSSLMFLKEGDRVSVR 119
           NPASLTKLMTG V+D A+D H+I  DD+VTVG DAWA+GNPVF GSSLMFLK GDRV+VR
Sbjct: 61  NPASLTKLMTGLVIDHALDQHKIGLDDVVTVGNDAWAQGNPVFKGSSLMFLKPGDRVTVR 120

Query: 120 DLSRGLIVDSGNDACVALADHVAGGQPQFVKMMNDYVQKLNLRDTHFETVHGLDAPGQHS 179
           DLSRG+I+DSGNDACVA+AD+VAG Q  FVK+MN+   +L L++THFETVHGLDAPGQ +
Sbjct: 121 DLSRGIIIDSGNDACVAMADYVAGNQAAFVKLMNEKSAQLGLQNTHFETVHGLDAPGQFT 180

Query: 180 SAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGA 239
           +A DLAV+SRAII  EP  YHMYSEKSLTWNGITQQNRNGLLWDK ++VDGLKTGHT+ A
Sbjct: 181 TAGDLAVISRAIIMSEPAEYHMYSEKSLTWNGITQQNRNGLLWDKNLHVDGLKTGHTASA 240

Query: 240 GFNLIASAVDGQRRLIAVVMGADSPKGREDQARKLLHWGQQNFDTVQILHSGKKVGTERI 299
           GFN+IASA +G RRLIAVVMG  S KGRE+QARKLL WG ++F TV +  +G+ +G E++
Sbjct: 241 GFNIIASATEGDRRLIAVVMGGKSSKGREEQARKLLTWGLRDFTTVHLFSAGQNLGQEKV 300

Query: 300 WYGDKEQVKLGTDQDFWLALPKAEVPNIKAKYVLDKKELEAPIAAHQRVGEIQLYDRDKV 359
           WYGD+ +V +G+ ++ +L+LPK+E   +KA+YV+    L+AP+   Q +GEI++ D  K+
Sbjct: 301 WYGDRHEVAVGSAKEEYLSLPKSEADKLKAQYVVSVPRLDAPLTQGQTIGEIRISDNGKL 360

Query: 360 VAHWPLVTLEAVDKGGLFSRMSDYL 384
           +   PLV L+ V +GG FSR+ DY+
Sbjct: 361 LKTLPLVVLQPVQQGGAFSRLMDYV 385