Pairwise Alignments

Query, 388 a.a., D-alanyl-D-alanine carboxypeptidase from Enterobacter asburiae PDN3

Subject, 400 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Escherichia coli ECOR38

 Score =  368 bits (944), Expect = e-106
 Identities = 179/367 (48%), Positives = 256/367 (69%), Gaps = 3/367 (0%)

Query: 18  SAFAAEPLDFSPQPPAIQAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAI 77
           +AFAAE    + + P++ A +W+LMDY +G++L  GN  ++ +PASLTK+MT YVV +A+
Sbjct: 24  TAFAAEQ---TVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQAL 80

Query: 78  DSHRITPDDIVTVGRDAWAKGNPVFDGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVAL 137
            + +I   D+VTVG+DAWA GNP   GSS+MFLK GD+VSV DL++G+I+ SGNDAC+AL
Sbjct: 81  KADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIAL 140

Query: 138 ADHVAGGQPQFVKMMNDYVQKLNLRDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPE 197
           AD+VAG Q  F+ +MN Y +KL L +T F+TVHGLDAPGQ S+A D+A+L +A+IH  PE
Sbjct: 141 ADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPE 200

Query: 198 FYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAV 257
            Y ++ EK  T+N I Q NRN LLW   +NVDG+KTG T+GAG+NL+ASA  G  RLI+V
Sbjct: 201 EYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISV 260

Query: 258 VMGADSPKGREDQARKLLHWGQQNFDTVQILHSGKKVGTERIWYGDKEQVKLGTDQDFWL 317
           V+GA + + R +++ KLL WG + F+TV  +       T+R+W+GDK +V LG  +   +
Sbjct: 261 VLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGSV 320

Query: 318 ALPKAEVPNIKAKYVLDKKELEAPIAAHQRVGEIQLYDRDKVVAHWPLVTLEAVDKGGLF 377
            +P+ ++ N+KA Y L + +L AP+   Q VG I      K +   PL+ +E V++GG F
Sbjct: 321 TIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTIDFQLNGKSIEQRPLIVMENVEEGGFF 380

Query: 378 SRMSDYL 384
            RM D++
Sbjct: 381 GRMWDFV 387