Pairwise Alignments

Query, 400 a.a., RND family efflux transporter, MFP subunit from Enterobacter asburiae PDN3

Subject, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

 Score =  363 bits (932), Expect = e-105
 Identities = 191/401 (47%), Positives = 268/401 (66%), Gaps = 5/401 (1%)

Query: 1   MKGSNKS---RWAIAAGIIVVVLAAAWY-WHSQSANSAAPAGASSQAQRPAGGGRHGMRG 56
           M+ SN     RW +   I+++V A AW+ W + +       G          GGR G  G
Sbjct: 1   MQASNSRSLRRWLVGLLILLLVAALAWWLWPAATPAHKEAGGVRGGKGMGMIGGRPGFGG 60

Query: 57  GA-LAPVQAATAVNKAVPRYLTGLGTITAANTVTVRSRVDGQLMAIHFQEGQQVKAGDLL 115
            +   PV+         P Y   LGT+TA NTV VRSRV G+L+ IHF+EGQ+VKAGDLL
Sbjct: 61  SSDPVPVRVVPVRIGDFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLL 120

Query: 116 AEIDPSQFKVALAQAQGQLAKDKATLANARRDLVRYQQLVKTNLVSRQELDTQQSLVSET 175
           AEIDP  +++AL QA+G LA+++A L NA+ DL RY+ L   + +++Q LDT ++ V++ 
Sbjct: 121 AEIDPRPYRIALQQAEGTLAQNQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQF 180

Query: 176 QGTIKADEAAVASAQLQLDWSRITAPIDGRVGLKQVDIGNQISSGDTTGIVVITQTHPID 235
           QG +K ++A V  A+L LD+++I API GRVGL+Q+D+GN +++ DTT +VVITQT PI+
Sbjct: 181 QGLVKTNQAQVNDARLNLDFTQIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTEPIN 240

Query: 236 LVFTLPESDIATVVQAQKAGKGLVVEAWDRSNKQKLSEGSLLSLDNQIDTTTGTIKLKAR 295
           + FTLPE++++TV++  ++G  L VEAWDR + +  S G L S+DNQIDTTTGT+K K R
Sbjct: 241 VAFTLPETELSTVLERYRSGASLPVEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLKFKGR 300

Query: 296 FNNQDDALFPNQFVNARMLVATEENAVVIPTAALQMGNEGNFVWVLNDDNKVSKHLVKTG 355
           F N+D ALFPNQFVN R+L  T +  V+ P AA+Q GN+G F +V+N+ + V+   +K G
Sbjct: 301 FENKDLALFPNQFVNVRLLADTLKQVVMAPAAAIQFGNDGTFAYVVNEQSTVNVRKLKVG 360

Query: 356 IQDSQTVVIAAGLSAGERVVTDGIDRLTEGAKVEVVEPAKQ 396
             D +  VI  GL AG+R+V +G DRL EG KVEVVE + Q
Sbjct: 361 ASDGENSVILDGLKAGDRLVLEGTDRLREGTKVEVVEDSSQ 401