Pairwise Alignments

Query, 400 a.a., RND family efflux transporter, MFP subunit from Enterobacter asburiae PDN3

Subject, 378 a.a., Multidrug efflux RND membrane fusion protein MexC from Pseudomonas putida KT2440

 Score =  161 bits (408), Expect = 3e-44
 Identities = 109/363 (30%), Positives = 179/363 (49%), Gaps = 14/363 (3%)

Query: 31  ANSAAPAGASSQAQRP-AGGGRHGMRGGALAPVQAATAVNKAVPRYLTGLGTITAANTVT 89
           A + A AG    A++  A    + +    LAP Q A A            G +       
Sbjct: 14  AMAIALAGCEPAAEQDGAANASYPVEIVTLAPEQVALAAELP--------GRVEPMRVAE 65

Query: 90  VRSRVDGQLMAIHFQEGQQVKAGDLLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLV 149
           VR+RV G ++   F+EG  VKAGD+L +IDP+ FK ALA+A+  LA+ +A    A+  + 
Sbjct: 66  VRARVPGIVLHKRFEEGADVKAGDVLFQIDPAPFKAALARAEADLARAQAVQQEAQARVK 125

Query: 150 RYQQLVKTNLVSRQELDTQQSLVSETQGTIKADEAAVASAQLQLDWSRITAPIDGRVGLK 209
           RY+ LVK   VS+Q+ D+  + +      +++ +A V +A+L L ++ +TAPI GR+G  
Sbjct: 126 RYEPLVKIEAVSQQDFDSATAELRSAGAAVRSAQADVQAARLNLGYATVTAPISGRIGRA 185

Query: 210 QVDIGNQISSGDTTGIVVITQTHPIDLVFTLPESDIATVVQAQKAGKGLVVEAWDRSNKQ 269
               G  +  G+ T +  I Q  PI + FT   +D   + QA K G  L  ++   + + 
Sbjct: 186 LATEGALVGQGEATLMARIQQLDPIYIDFTQSAADALRLRQALKDG-ALSADSQRLTAQV 244

Query: 270 KLSE----GSLLSLDNQIDTTTGTIKLKARFNNQDDALFPNQFVNARMLVATEENAVVIP 325
           + ++    G L+  D  +D  TG + L+ RF+N D  L P  +V  R    T+ +A+++P
Sbjct: 245 EGTDFQRSGELMFTDVSVDRGTGQVILRGRFDNADGTLLPGMYVRVRTPQGTDNHAILVP 304

Query: 326 TAALQMGNEGNFVWVLNDDNKVSKHLVKTGIQDSQTVVIAAGLSAGERVVTDGIDRLTEG 385
             A+Q G++G    ++  +       V+TG+       I  GL  G++V+      L  G
Sbjct: 305 QRAVQRGSDGQARVLVATNGIAEARAVRTGVMQGSRWQITEGLEPGDQVIVGSPAGLAPG 364

Query: 386 AKV 388
             V
Sbjct: 365 MPV 367