Pairwise Alignments

Query, 332 a.a., ABC-type sugar transport system, periplasmic component from Enterobacter asburiae PDN3

Subject, 309 a.a., Inositol transport system sugar-binding protein (from data) from Pseudomonas simiae WCS417

 Score =  130 bits (327), Expect = 4e-35
 Identities = 98/333 (29%), Positives = 165/333 (49%), Gaps = 32/333 (9%)

Query: 3   KKVLTLSAVMASMLFGAA-AHAADTRIGVTIYKYDDNFMSVVRKAIEKDAKAAPD---VQ 58
           K  +  +A+  SML  +  A AAD +IGV++  +DD F++ +R+ ++K AK+ P    VQ
Sbjct: 2   KTPIRFTALALSMLLASGVASAADLKIGVSMSAFDDTFLTYLREDMDKQAKSYPKGDGVQ 61

Query: 59  LLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPIVFFNKEPS 118
           L   D++ D  KQ  Q++  +++ V A+ +N VD A+   +I+ A    +P+VF N+ P 
Sbjct: 62  LQFEDARADVVKQLSQVENFISQKVDAIIVNPVDTASTANIIKAATAAKIPLVFVNRRPD 121

Query: 119 RKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANPNWDLNKDGQIQFVLLKGEPGHPDA 178
            + L     A  V +D  E+G +Q   IA+      N           V+L G+  +   
Sbjct: 122 SQTLAPGVAA--VTSDDVEAGKLQMQYIAEKLGGKGN----------IVILLGDLANNST 169

Query: 179 EARTTYVIKELNDK--GLKTQQLALDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDA 236
             RT  V KE+  K  G+K +Q    T +W   +    ++ WL+       + V++NND 
Sbjct: 170 TNRTKGV-KEVLTKYPGIKIEQE--QTGIWLRDRGMTLVNDWLT--QGRDFQAVLSNNDE 224

Query: 237 MAMGAVEALKAHNKSSIPVFGVDALPEALALVKSGAMAGTVLNDANNQAKATFDLAKNLA 296
           MA+GA  ALK+  K  + + GVD  P+ L  +  G M  +   DA  QA  + + A+ +A
Sbjct: 225 MAIGAAMALKSAGKKGVLIAGVDGTPDGLNAITKGDMTVSAFQDAKGQADKSVETARKMA 284

Query: 297 DGKGAADGTSWKIENKIVRVPYVGVDQSNLAEF 329
             +         IE  +V +P+  +   N+ +F
Sbjct: 285 KNE--------PIEQNVV-IPFQLITPDNVKDF 308