Pairwise Alignments

Query, 332 a.a., ABC-type sugar transport system, periplasmic component from Enterobacter asburiae PDN3

Subject, 295 a.a., ribose ABC transporter substrate-binding protein RbsB from Serratia liquefaciens MT49

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 72/277 (25%), Positives = 125/277 (45%), Gaps = 21/277 (7%)

Query: 1   MNKKVLTLSAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVRKAIEKDAKAAPDVQLL 60
           M K  +  SA   S    A A A DT I + +   ++ F   +++  +++A       L+
Sbjct: 3   MKKLAILASAFALSATLSANALAKDT-IALVVSTLNNPFFVSMKEGAQQEANKL-GYNLV 60

Query: 61  MNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPIVFFNKEPSRK 120
           + DSQN+ +K+   +  L+ +  K L IN  D  A G  I+ A    +P++  ++  S+ 
Sbjct: 61  VLDSQNNPAKELANVQDLMVQAPKLLLINPTDSDAVGNAIKMANQAKIPVITLDRVASKG 120

Query: 121 ALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANPNWDLNKDGQIQFVLLKGEPGHPDAEA 180
                D   ++ +D++  G + GD IAK   A+           + + L+G  G   A  
Sbjct: 121 -----DVVSHIASDNRVGGKMAGDFIAKKVGADA----------KVIQLEGIAGTSAARE 165

Query: 181 RTTYVIKELNDKGLKTQQLALDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMG 240
           R     + L+    K   LA   A +D  +  + M   L+      ++ V A ND MA+G
Sbjct: 166 RGEGFKQSLDQNKFKL--LASQPADFDRTKGLNVMQNLLTAHP--DVQAVFAQNDEMALG 221

Query: 241 AVEALKAHNKSSIPVFGVDALPEALALVKSGAMAGTV 277
           A+ AL+   K+ + V G D   + +  V+ G +A TV
Sbjct: 222 ALRALQTAGKTDVVVVGFDGTADGVKAVEGGKLAATV 258