Pairwise Alignments

Query, 332 a.a., ABC-type sugar transport system, periplasmic component from Enterobacter asburiae PDN3

Subject, 308 a.a., substrate-binding domain-containing protein from Serratia liquefaciens MT49

 Score =  121 bits (303), Expect = 3e-32
 Identities = 88/305 (28%), Positives = 148/305 (48%), Gaps = 22/305 (7%)

Query: 3   KKVLTLSAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVRKAIEKDAKAAPDVQLLMN 62
           KK++ L   + S+     A     ++GV+I + DD F+S +R  I + AK  PD++L   
Sbjct: 2   KKIILLCLSLLSLSPSVFA----VQVGVSIAQMDDVFLSRLRGYIIERAKTHPDLKLQFE 57

Query: 63  DSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPIVFFNKEPSRKAL 122
           D+Q    KQ  Q+   +   V  + +N VD      + E AR   +P+++ N+ PS   +
Sbjct: 58  DAQGAVDKQLSQVQSFINGKVDVIIVNPVDTQGTKNITEAARKAKIPLIYLNRMPSDSTM 117

Query: 123 DSYDKAYYVGTDSKESGIIQGDLIAKHWAANPNWDLNKDGQ-IQFVLLKGEPGHPDAEAR 181
              +   Y+G+D  E+G +Q   +A         ++ KD + +   ++KG   + DA   
Sbjct: 118 G--NGISYIGSDEIEAGRLQMQYLA---------EMVKDRKSVNVAIMKGLLSN-DATRF 165

Query: 182 TTYVIKELNDKGLKTQQLALDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGA 241
            T   KE+  K      +  DTA W      + M+ W+   + +KI+++ +N D MA+GA
Sbjct: 166 RTQGAKEIIAKNPNMHVILEDTAKWMREDGMNLMNNWIL--SGDKIDILSSNADEMAIGA 223

Query: 242 VEALKAHNKS---SIPVFGVDALPEALALVKSGAMAGTVLNDANNQAKATFDLAKNLADG 298
             A+K++ KS    I + G D  P  L  +K G +  TV  DA +QA    D+A+  A G
Sbjct: 224 AMAIKSNGKSVGKDILIGGTDGGPNGLQAIKKGMLTVTVFQDAKSQAYGAVDMAEQAAKG 283

Query: 299 KGAAD 303
           +   D
Sbjct: 284 EAIKD 288