Pairwise Alignments

Query, 332 a.a., ABC-type sugar transport system, periplasmic component from Enterobacter asburiae PDN3

Subject, 296 a.a., Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 24/277 (8%)

Query: 3   KKVLTL-SAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVRKAIEKDAKAAPDVQLLM 61
           KK+ TL SAV  S    A A A DT I + I   ++ F   ++   +K+A       L++
Sbjct: 4   KKLATLVSAVALSATVSANAMAKDT-IALVISTLNNPFFVSLKDGAQKEADKL-GYNLVV 61

Query: 62  NDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPIVFFNKEPSRKA 121
            DSQN+ +K+   +  L  +G K L IN  D  A G  ++ A    +P++  +++ ++  
Sbjct: 62  LDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQAKIPVITLDRQATKG- 120

Query: 122 LDSYDKAYYVGTDSKESGIIQGDLIAKHWAANPNWDLNKDGQ-IQFVLLKGEPGHPDAEA 180
               D   ++ +D+   G I GD IAK           K G+  + + L+G  G   A  
Sbjct: 121 ----DVVSHIASDNVLGGKIAGDYIAK-----------KAGEGAKVIELQGIAGTSAARE 165

Query: 181 RTTYVIKELNDKGLKTQQLALDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMG 240
           R     + +     K   LA   A +D  +  + M   L+      ++ V A ND MA+G
Sbjct: 166 RGEGFQQAV--AAHKFNVLASQPADFDRTKGLNVMQNLLTAHP--DVQAVFAQNDEMALG 221

Query: 241 AVEALKAHNKSSIPVFGVDALPEALALVKSGAMAGTV 277
           A+ AL+   K+ + V G D  P+    VK G +A T+
Sbjct: 222 ALRALQTAGKADVMVVGFDGTPDGEKAVKDGKLAATI 258