Pairwise Alignments

Query, 309 a.a., ABC-type sugar transport system, periplasmic component from Enterobacter asburiae PDN3

Subject, 296 a.a., ribose ABC transporter substrate-binding protein RbsB from Escherichia coli ECOR27

 Score =  152 bits (383), Expect = 1e-41
 Identities = 91/266 (34%), Positives = 150/266 (56%), Gaps = 10/266 (3%)

Query: 1   MKKLIV----AALIAMTSGAALAENEQIVFSTPNLAMPFEVHMQRTAVKAAKEMGVKLQV 56
           MKKL       AL A  S  A+A+ + I      L  PF V ++  A K A ++G  L V
Sbjct: 3   MKKLATLVSAVALSATVSANAMAK-DTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVV 61

Query: 57  LDGQGSSPKQVADLENAITRGAQGFIVSPNDVNAVSSAVDEIQDAKLPIVTLDRSVDSQK 116
           LD Q +  K++A++++   RG +  +++P D +AV +AV     A +P++TLDR     +
Sbjct: 62  LDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQATKGE 121

Query: 117 KVPHFGANNYKGGQAVGDFVKTKFPNGADIILLTGQPGSSSNIERTKGIRDSLKAGGDKY 176
            V H  ++N  GG+  GD++  K   GA +I L G  G+S+  ER +G + ++ A   K+
Sbjct: 122 VVSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAA--HKF 179

Query: 177 KIVADQTGNWMRSEGMRIVESVLPSLPKRPQVILSANDDMALGAIEALQSQGVKPGEILV 236
            ++A Q  ++ R++G+ +++++L + P   Q + + ND+MALGA+ ALQ+ G    +++V
Sbjct: 180 NVLASQPADFDRTKGLNVMQNLLTAHPD-VQAVFAQNDEMALGALRALQTAG--KSDVMV 236

Query: 237 TGFDAVPEALARVRDGWLAVTADQRP 262
            GFD  P+    V DG LA T  Q P
Sbjct: 237 VGFDGTPDGEKAVNDGKLAATIAQLP 262